SoDA: implementation of a 3D alignment algorithm for inference of antigen receptor recombinations.
about
Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysisThe analysis of clonal expansions in normal and autoimmune B cell repertoiresViral Escape from Neutralizing Antibodies in Early Subtype A HIV-1 Infection Drives an Increase in Autologous Neutralization BreadthIsotype-switched follicular lymphoma displays dissociation between activation-induced cytidine deaminase expression and somatic hypermutationConsistency of VDJ Rearrangement and Substitution Parameters Enables Accurate B Cell Receptor Sequence AnnotationAssigning and visualizing germline genes in antibody repertoiresH3N2 influenza infection elicits more cross-reactive and less clonally expanded anti-hemagglutinin antibodies than influenza vaccinationGetting started in computational immunologyVDJML: a file format with tools for capturing the results of inferring immune receptor rearrangementsrepgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data.iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences.Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodiesA tamoxifen inducible knock-in allele for investigation of E2A function.Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman PrimatespRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires.Toxin-coupled MHC class I tetramers can specifically ablate autoreactive CD8+ T cells and delay diabetes in nonobese diabetic mice.On the genomics of immunoglobulins in the gray, short-tailed opossum Monodelphis domesticaIsolation of a monoclonal antibody that targets the alpha-2 helix of gp120 and represents the initial autologous neutralizing-antibody response in an HIV-1 subtype C-infected individual.Isolation of a human anti-HIV gp41 membrane proximal region neutralizing antibody by antigen-specific single B cell sorting.TCR mu recombination and transcription relative to the conventional TCR during postnatal development in opossums.Cooperation of B cell lineages in induction of HIV-1-broadly neutralizing antibodies.Isolation of HIV-1-neutralizing mucosal monoclonal antibodies from human colostrumEarly postnatal B cell ontogeny and antibody repertoire maturation in the opossum, Monodelphis domesticaFractional Third and Fourth Dose of RTS,S/AS01 Malaria Candidate Vaccine: A Phase 2a Controlled Human Malaria Parasite Infection and Immunogenicity Study.Automated cleaning and pre-processing of immunoglobulin gene sequences from high-throughput sequencing.Automated analysis of immunoglobulin genes from high-throughput sequencing: life without a templateRestricted isotype, distinct variable gene usage, and high rate of gp120 specificity of HIV-1 envelope-specific B cells in colostrum compared with those in blood of HIV-1-infected, lactating African womenDetecting selection in immunoglobulin sequencesPeptide/MHC tetramer-based sorting of CD8⁺ T cells to a leukemia antigen yields clonotypes drawn nonspecifically from an underlying restricted repertoire.epitopes immediately below the base of the V3 loop of gp120 as targets for the initial autologous neutralizing antibody response in two HIV-1 subtype B-infected individuals.Analysis of a clonal lineage of HIV-1 envelope V2/V3 conformational epitope-specific broadly neutralizing antibodies and their inferred unmutated common ancestors.VDJSeq-Solver: in silico V(D)J recombination detection tool.IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.HIV-1 VACCINES. Diversion of HIV-1 vaccine-induced immunity by gp41-microbiota cross-reactive antibodies.Likelihood-Based Inference of B Cell Clonal Families.Antibody-dependent cellular cytotoxicity-mediating antibodies from an HIV-1 vaccine efficacy trial target multiple epitopes and preferentially use the VH1 gene family.B cell exchange across the blood-brain barrier in multiple sclerosis.Discrimination of germline V genes at different sequencing lengths and mutational burdens: A new tool for identifying and evaluating the reliability of V gene assignment.The restricted DH gene reading frame usage in the expressed human antibody repertoire is selected based upon its amino acid content.
P2860
Q21089590-3EFF7D24-17D8-46E9-AF4D-837539793CFEQ24646236-DA1CBF6D-0EED-41FC-9EE6-773D67FE035FQ26801600-234DFAFA-9560-4028-8FB8-F2D6B0FEFDA7Q27676728-9787BE1B-B1F8-4A93-9457-7CD270877F36Q28260230-B0B6E98C-1014-4390-BBF1-D35FAD67868BQ28602773-7E532068-22AD-40C0-AC7D-668597B6903CQ28640605-FAB94B0F-30A9-462B-8866-D53A479D3373Q28743596-300CA5F9-6B45-448B-8A8D-1E22B3B8C41FQ28757368-6B761964-4A44-43BB-813E-2EF2C05AED7CQ28843105-2F8DD305-EAB7-4305-B202-3D6991A47B95Q31092433-E27904F8-EFED-4407-81E1-F43579536AC9Q33282962-F20FE79C-2D40-47C1-A7D7-358AE6903E81Q33393945-A9747F96-15D8-4F4B-B44B-FF198EC8BE8EQ33509909-47E42546-ABEF-4229-ABF4-D5CE86E72C2DQ33612459-490886AF-3A7B-48F8-A641-2913027DBD58Q33807674-94CDDD53-3610-44F8-9344-EB7494DB6F38Q33844333-223EA64F-905B-4854-836E-D91011EBE23EQ33893506-7DAE0781-E72A-47D8-B17D-98BA88A33B2DQ33912373-D2C9B712-4260-429D-A5ED-C68E8E7FE1DEQ34042758-9E0ABD64-69AC-4201-8478-A38615E3E612Q34064453-55141902-0394-4CD2-BAB7-5AC9DEAFC6E7Q34114798-F76D15F8-D1F9-4711-9E62-456F365874E1Q34280115-4F870700-4E98-41C1-9E48-317A1A11D030Q34430426-4051195B-7F5F-4CA7-9321-D371F0BF38CEQ34530710-7BC07BED-19DF-4DD5-972F-1CADE14EA416Q34537815-222B0B66-81AD-4E18-8593-C4C6D7A32780Q34974373-94618AE9-0E75-41E8-A607-93C680135F05Q35058698-778B57AE-1901-4F20-BB24-67E5FB40384EQ35075665-CCAAED08-FDBE-4EF2-B53A-52CFD77EDBFBQ35152121-6CDBA441-1EEA-4B30-BE78-BB7173D4226AQ35192660-3670DF72-9BDC-493C-B39B-1FEBEA30655FQ35382871-431EB27B-0D26-444A-9B75-C0F1C600438EQ35583972-617D6DC0-4E00-4582-8AFF-285FFABE53F1Q35662996-B7DF2B3E-E193-41E6-AAC3-7D4EC2127D98Q35728947-84BCA7CE-6386-412D-997F-7A344CA94C12Q36165278-02210FEF-91B4-4746-861C-68F69EF48F26Q36363231-D570E066-BADB-4AA1-91DB-D3BEBF1D5AFCQ36498036-1AA41BEA-A0C3-4D53-A59C-BDB7EAFF8D53Q36739219-313A3FAE-A6B2-4E76-9277-A10478D139FBQ36864231-76F69410-CE53-4832-96A3-764DC2E5513E
P2860
SoDA: implementation of a 3D alignment algorithm for inference of antigen receptor recombinations.
description
2005 nî lūn-bûn
@nan
2005 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@ast
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@en
type
label
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@ast
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@en
prefLabel
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@ast
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@en
P2860
P356
P1433
P1476
SoDA: implementation of a 3D a ...... tigen receptor recombinations.
@en
P2093
Joseph M Volpe
Lindsay G Cowell
P2860
P304
P356
10.1093/BIOINFORMATICS/BTK004
P407
P577
2005-12-15T00:00:00Z