about
Predicting resistance mutations using protein design algorithmsComputational Design of the Sequence and Structure of a Protein-Binding PeptideIncreasing Sequence Diversity with Flexible Backbone Protein Design: The Complete Redesign of a Protein Hydrophobic CoreProtein design using continuous rotamersAssessment of flexible backbone protein design methods for sequence library prediction in the therapeutic antibody Herceptin-HER2 interfacePredicting the tolerated sequences for proteins and protein interfaces using RosettaBackrub flexible backbone designProtein side-chain modeling with a protein-dependent optimized rotamer library.Explicit orientation dependence in empirical potentials and its significance to side-chain modelingcomets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Protein Design Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence.Automated NMR Assignment and Protein Structure Determination using Sparse Dipolar Coupling Constraints.LUTE (Local Unpruned Tuple Expansion): Accurate Continuously Flexible Protein Design with General Energy Functions and Rigid Rotamer-Like Efficiency.LoCo: a novel main chain scoring function for protein structure prediction based on local coordinatesA Bayesian approach for determining protein side-chain rotamer conformations using unassigned NOE data.Dead-end elimination with perturbations (DEEPer): a provable protein design algorithm with continuous sidechain and backbone flexibility.The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles.Computational methods for de novo protein design and its applications to the human immunodeficiency virus 1, purine nucleoside phosphorylase, ubiquitin specific protease 7, and histone demethylases.Discovery of entry inhibitors for HIV-1 via a new de novo protein design framework.OSPREY: protein design with ensembles, flexibility, and provable algorithms.Computational structure-based redesign of enzyme activity.Discovering free energy basins for macromolecular systems via guided multiscale simulation.A critical analysis of computational protein design with sparse residue interaction graphs.Direct Calculation of Protein Fitness Landscapes through Computational Protein Design.OPUS-Rota: a fast and accurate method for side-chain modeling.BWM*: A Novel, Provable, Ensemble-based Dynamic Programming Algorithm for Sparse Approximations of Computational Protein Design.Algorithm for backrub motions in protein design.Computer-aided design of functional protein interactions.Engineering the acyltransferase substrate specificity of assembly line polyketide synthases.Computational tools for the evaluation of laboratory-engineered biocatalysts.Computational protein design with backbone plasticity.Deterministic Search Methods for Computational Protein Design.Compact Representation of Continuous Energy Surfaces for More Efficient Protein Design.Fast gap-free enumeration of conformations and sequences for protein design.CATS (Coordinates of Atoms by Taylor Series): protein design with backbone flexibility in all locally feasible directions.Substrate transport pathway inside outward open conformation of EmrD: a molecular dynamics simulation study.BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces.Modeling Structures and Motions of Loops in Protein MoleculesiCFN: an efficient exact algorithm for multistate protein design
P2860
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P2860
description
2007 nî lūn-bûn
@nan
2007 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Dead-end elimination with backbone flexibility.
@ast
Dead-end elimination with backbone flexibility.
@en
Dead-end elimination with backbone flexibility.
@nl
type
label
Dead-end elimination with backbone flexibility.
@ast
Dead-end elimination with backbone flexibility.
@en
Dead-end elimination with backbone flexibility.
@nl
prefLabel
Dead-end elimination with backbone flexibility.
@ast
Dead-end elimination with backbone flexibility.
@en
Dead-end elimination with backbone flexibility.
@nl
P356
P1433
P1476
Dead-end elimination with backbone flexibility.
@en
P2093
Bruce R Donald
Ivelin Georgiev
P304
P356
10.1093/BIOINFORMATICS/BTM197
P407
P577
2007-07-01T00:00:00Z