The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding
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TEPITOPEpan: extending TEPITOPE for peptide binding prediction covering over 700 HLA-DR moleculesStructural allele-specific patterns adopted by epitopes in the MHC-I cleft and reconstruction of MHC:peptide complexes to cross-reactivity assessmentImmunoNodes - graphical development of complex immunoinformatics workflowsMHC class II epitope predictive algorithms.The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine DesignLimitations of Ab initio predictions of peptide binding to MHC class II moleculesUse of "one-pot, mix-and-read" peptide-MHC class I tetramers and predictive algorithms to improve detection of cytotoxic T lymphocyte responses in cattle.PSSMHCpan: a novel PSSM-based software for predicting class I peptide-HLA binding affinityNetMHCIIpan-2.0 - Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure.Development and validation of an epitope prediction tool for swine (PigMatrix) based on the pocket profile methodAutomated benchmarking of peptide-MHC class I binding predictions.Immunoinformatics and epitope prediction in the age of genomic medicine.NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ.Identification of immunotherapeutic targets by genomic profiling of rectal NET metastases.An effective and effecient peptide binding prediction approach for a broad set of HLA-DR molecules based on ordered weighted averaging of binding pocket profiles.Improved pan-specific MHC class I peptide-binding predictions using a novel representation of the MHC-binding cleft environment.Major histocompatibility complex class I binding predictions as a tool in epitope discovery.Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools.Towards in silico design of epitope-based vaccines.Reverse Vaccinology: The Pathway from Genomes and Epitope Predictions to Tailored Recombinant Vaccines.Computational genomics tools for dissecting tumour-immune cell interactions.T-Cell Epitope Prediction.Applications of Immunogenomics to Cancer.Development of Peptide Vaccines in Dengue.In silico and cell-based analyses reveal strong divergence between prediction and observation of T-cell-recognized tumor antigen T-cell epitopes.Integrated computational prediction and experimental validation identifies promiscuous T cell epitopes in the proteome of Mycobacterium bovis.In silico peptide-binding predictions of passerine MHC class I reveal similarities across distantly related species, suggesting convergence on the level of protein function.Bioinformatics identification of antigenic peptide: predicting the specificity of major MHC class I and II pathway players.Structure-based prediction of protein-peptide binding regions using Random Forest.Deep convolutional neural networks for pan-specific peptide-MHC class I binding prediction.NetTepi: an integrated method for the prediction of T cell epitopes.A Targeted LC-MS Strategy for Low-Abundant HLA Class-I-Presented Peptide Detection Identifies Novel Human Papillomavirus T-Cell Epitopes.
P2860
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P2860
The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding
description
2009 nî lūn-bûn
@nan
2009 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի մարտին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
The PickPocket method for pred ...... ication to MHC-peptide binding
@ast
The PickPocket method for pred ...... ication to MHC-peptide binding
@en
type
label
The PickPocket method for pred ...... ication to MHC-peptide binding
@ast
The PickPocket method for pred ...... ication to MHC-peptide binding
@en
prefLabel
The PickPocket method for pred ...... ication to MHC-peptide binding
@ast
The PickPocket method for pred ...... ication to MHC-peptide binding
@en
P2860
P356
P1433
P1476
The PickPocket method for pred ...... ication to MHC-peptide binding
@en
P2093
P2860
P304
P356
10.1093/BIOINFORMATICS/BTP137
P407
P577
2009-03-17T00:00:00Z