Polymerase chain reaction primers miss half of rRNA microbial diversity. - Wikidata - awgldk - TriplyDB

Polymerase chain reaction primers miss half of rRNA microbial diversity.

Polymerase chain reaction primers miss half of rRNA microbial diversity.

http://www.wikidata.org/entity/Q33495081

about

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies Comparative analysis of bacterial communities in a potato field as determined by pyrosequencing Shotgun pyrosequencing metagenomic analyses of dusts from swine confinement and grain facilities Reference databases for taxonomic assignment in metagenomics Human gut microbiota: repertoire and variations An introduction to the analysis of shotgun metagenomic data Challenges and opportunities of airborne metagenomics Evaluation of Lysis Methods for the Extraction of Bacterial DNA for Analysis of the Vaginal Microbiota A comparative study of microbial diversity and community structure in marine sediments using poly(A) tailing and reverse transcription-PCR Sequencing our way towards understanding global eukaryotic biodiversity Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance.Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness.Dynamic microbial community associated with iron-arsenic co-precipitation products from a groundwater storage system in Bangladesh.ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases.Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the "terroir" Concept.Composition of the landfill microbial community as determined by application of domain- and group-specific 16S and 18S rRNA-targeted oligonucleotide probes Land use intensity controls actinobacterial community structure Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method.Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics.The Effects of Cropping Regimes on Fungal and Bacterial Communities of Wheat and Faba Bean in a Greenhouse Pot Experiment Differ between Plant Species and Compartment.Bacterial diversity in biofilms formed on condenser tube surfaces in a nuclear power plant.Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities The bias associated with amplicon sequencing does not affect the quantitative assessment of bacterial community dynamics PhylOTU: a high-throughput procedure quantifies microbial community diversity and resolves novel taxa from metagenomic data.Temporal development of the infant gut microbiota in immunoglobulin E-sensitized and nonsensitized children determined by the GA-map infant array Characterization of the bacterial communities of life stages of free living lone star ticks (Amblyomma americanum)Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironments.Microbial communities show parallels at sites with distinct litter and soil characteristics Microbial fouling community analysis of the cooling water system of a nuclear test reactor with emphasis on sulphate reducing bacteria.Microbial community changes elicited by exposure to cyanobacterial allelochemicals.Two decades of describing the unseen majority of aquatic microbial diversity.454 pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants.Amplification by PCR artificially reduces the proportion of the rare biosphere in microbial communities.i-rDNA: alignment-free algorithm for rapid in silico detection of ribosomal gene fragments from metagenomic sequence data sets.The under-recognized dominance of Verrucomicrobia in soil bacterial communities.High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing Reconstruction of ribosomal RNA genes from metagenomic data.PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets.Rapid phylogenetic and functional classification of short genomic fragments with signature peptides

P2860

Q21146713-379E6D53-68B2-46A6-B708-9A7C03F56D9B Q21560934-F7A14799-21C7-4104-AF5F-B4C531E4DFAB Q23920301-8AB7AC51-82E4-4ACD-8225-F7D79FDBDD74 Q27004656-62BCC983-0472-4828-8DE6-82CBE134C24E Q27020975-F8DE4171-62E2-4124-B9DD-2C6F1FFE3A6A Q27028042-557C89BF-88BB-4987-B1E2-B170AD88882C Q28083685-F8A4C052-6DE6-42E6-B2F7-FA1199ACDEC6 Q28554228-8B0771AB-64D6-4992-B0B8-16C5EB6F2DE9 Q28681345-81B8BF73-6E26-4588-8F5E-889C0F59274B Q28730952-F8EB2DC1-1935-4CBD-B945-D46197AEAAAA Q30424103-90EE8A9D-6EFC-4177-92D0-71D45613A683 Q30502976-C4CA4370-F209-4F97-A355-3733EB230053 Q31048966-7DDBB27D-696B-495F-8613-515CEC170232 Q33629401-28AE519C-A831-4C7E-8980-0EC38FE20C24 Q33644220-CAC3DC3E-A5B1-4183-ACF1-FA1629ED2274 Q33646265-F8A2CB44-250E-4F70-8139-D9AFB583C3D4 Q33649093-2FA44454-75DA-43A3-AFF5-719C4CCCFDBF Q33711318-31BC6E52-C29D-4465-B757-D26B08821FE7 Q33715118-26AEEADD-5BD7-47D6-B4FF-E04497F18BC9 Q33730414-FB6DC79A-E305-4F4B-BBF0-D168306A8217 Q33735408-369A1B99-60B9-4C4F-9C41-6A5B7256DAA1 Q33740713-BEC3CCB6-0B25-41A0-B0A3-C83F5B2C28F9 Q33742872-C6FB80A0-A7E7-4BE9-9710-174B020EEC20 Q33748729-C3A697A8-1CD7-4DEE-A940-1FA2019FB42A Q33809343-A8B5C664-09D2-47FD-977E-1273BF17A2CD Q33926628-443BB389-7CFF-43DF-8EC0-6D0CD239CAC0 Q33939945-8FD7C982-6BF9-4E89-A183-D9841B4FA613 Q34013859-092177E6-2449-46F3-B01A-03B2CFC0FBFD Q34021617-ADDD458C-71C6-4E7D-A11E-086E6A803509 Q34022150-C0D68CDA-2265-4D8D-B24B-A59DF20E3773 Q34030517-169255E0-F470-4281-A723-51F3FD5FB6DE Q34076828-28592403-F50D-4D50-9023-0083A0B750BF Q34101452-65E17A0E-AC4C-4C62-8615-27D4C662A88A Q34130867-1C3E44A2-7951-4F30-8BC4-AA5481F95E38 Q34173554-DBFA70C8-2610-4BA7-B094-066DD183BB3B Q34248981-D2B72D78-2CC4-4C82-9390-D34146BC6A76 Q34322098-08B7851B-CC8A-461B-9C39-624F738CCC79 Q34326661-2F5FB743-61A1-4BEA-BE9C-0F29A7F225BB Q34384736-8E7E139A-EC59-497D-9E69-CB08AABFBDC2 Q34394295-ED31B821-F9EA-48C9-9E20-A2C29DE540B5

P2860

Polymerase chain reaction primers miss half of rRNA microbial diversity.

http://www.wikidata.org/entity/Q33495081

description

2009 nî lūn-bûn

@nan

2009 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2009年の論文

@ja

2009年論文

@yue

2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

@zh-tw

2009年论文

@wuu

name

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@ast

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@en

type

label

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@ast

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@en

prefLabel

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@ast

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@en

P1433

Q33495081-787DFFCD-E8A4-440D-9383-C30EE2651298

P1476

Q33495081-FB56C5FD-2245-4BDE-B4F7-2F46B173E507

P2093

Q33495081-0F1512AB-4B27-492E-9B93-5E358DA53021

Q33495081-94731E1A-86BF-4EAC-8934-134084807DEC

Q33495081-9D38C6D9-5A68-4CC4-AC0C-14DAB2AD78C8

Q33495081-A71A6F37-04F6-4B57-ABB4-CB9273840E67

Q33495081-D95387B0-E467-4DF9-9D59-FC696EA27DE4

P2860

Q33495081-0400B107-D69B-4D4C-BA89-F261CA78C7BC

Q33495081-0FCE7283-5383-474D-9EA9-4EA0E8F8BE61

Q33495081-18164E72-3679-4A45-B0D4-065490759AD2

Q33495081-19F281B5-20AE-4A8F-948B-1CC43917F5B9

Q33495081-2BC7E18C-CC2B-464A-B8B7-0B923AEEA66A

Q33495081-3104DAB6-C379-4CB0-A2C1-71DE7B81C3C7

Q33495081-46416DA4-F66B-4EDD-BBAC-C715625D4FC8

Q33495081-4D7D442E-FAA8-4847-B9D7-5CD9CE529309

Q33495081-503FA71E-0C6D-479B-A09A-3167B1EF6536

Q33495081-5787C334-2109-49C7-BFF9-0B16ACD46533

P2888

Q33495081-B167BCA7-0022-41F1-9851-84DD4CAB3DD1

P304

Q33495081-9A0B17F2-BC05-478F-9C60-422716D26365

P31

Q33495081-CF1C2531-3138-4D12-885F-053E7DBD0EF9

P356

Q33495081-1CDA893E-C051-43CD-803A-31B97CC7C469

P433

Q33495081-F72E5C80-27CD-4E59-8318-B93F933533A4

P478

Q33495081-B9E8AEF6-3F7D-41D2-863B-2BD77F28DAED

P577

Q33495081-8F93F853-30CE-4F5A-B7B5-E5EB692D5896

P6179

Q33495081-F9D5BB62-1A83-43D4-A096-BE5301977890

P698

Q33495081-40B6701A-C8C2-4633-A31E-167E5695B1A7

P921

Q33495081-498F377B-045F-48CF-AF5F-DD01ED65107C

P356

P1433

The ISME Journal

P1476

Polymerase chain reaction primers miss half of rRNA microbial diversity.

@en

P2093

Chesley Leslin

http://www.w3.org/2001/XMLSchema#string

John Bunge

http://www.w3.org/2001/XMLSchema#string

Slava S Epstein

http://www.w3.org/2001/XMLSchema#string

Sunhee Hong

http://www.w3.org/2001/XMLSchema#string

Sunok Jeon

http://www.w3.org/2001/XMLSchema#string

P2860

Status of the Microbial Census

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Estimating prokaryotic diversity and its limits

Microbial diversity in the deep sea and the underexplored "rare biosphere"

Environmental genome shotgun sequencing of the Sargasso Sea

Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat

PCR-SSCP comparison of 16S rDNA sequence diversity in soil DNA obtained using different isolation and purification methods.

Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys.

Bacterial community structure associated with a dimethylsulfoniopropionate-producing North Atlantic algal bloom.

Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: a cautionary tale.

P2888

P304

1365-1373

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1038/ISMEJ.2009.89

http://www.w3.org/2001/XMLSchema#string

P433

12

http://www.w3.org/2001/XMLSchema#string

P478

3

http://www.w3.org/2001/XMLSchema#string

P577

2009-08-20T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P6179

1008503751

http://www.w3.org/2001/XMLSchema#string

P698

19693101

http://www.w3.org/2001/XMLSchema#string

P921