about
Genome-wide chromatin remodeling identified at GC-rich long nucleosome-free regionsEvaluation of algorithm performance in ChIP-seq peak detectionPractical guidelines for the comprehensive analysis of ChIP-seq dataZerone: a ChIP-seq discretizer for multiple replicates with built-in quality control.Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1Genome-wide signatures of transcription factor activity: connecting transcription factors, disease, and small moleculesGlobal analysis of the regulon of the transcriptional repressor LexA, a key component of SOS response in Mycobacterium tuberculosis.Features that define the best ChIP-seq peak calling algorithmsGenome-wide analysis of functional sirtuin chromatin targets in yeast.A novel Bayesian change-point algorithm for genome-wide analysis of diverse ChIPseq data typesAccounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data.Some Statistical Strategies for DAE-seq Data Analysis: Variable Selection and Modeling Dependencies among Observations.Statistical Issues in the Analysis of ChIP-Seq and RNA-Seq Data.bPeaks: a bioinformatics tool to detect transcription factor binding sites from ChIPseq data in yeasts and other organisms with small genomes.MULTIPLE TESTING OF LOCAL MAXIMA FOR DETECTION OF PEAKS IN CHIP-SEQ DATA.Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq dataNonparametric Tests for Differential Histone Enrichment with ChIP-Seq Data.Genomic feature extraction and comparison based on global alignment of ChIP-sequencing data.Modelling ChIP-seq Data Using HMMs.ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip dataChIP-PaM: an algorithm to identify protein-DNA interaction using ChIP-Seq dataHPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data.PeakAnalyzer: genome-wide annotation of chromatin binding and modification loci.Processing and analyzing ChIP-seq data: from short reads to regulatory interactions.Characterising ChIP-seq binding patterns by model-based peak shape deconvolution.BayesPeak--an R package for analysing ChIP-seq dataChIPseqR: analysis of ChIP-seq experimentsStatistical quantification of methylation levels by next-generation sequencing.An integrated ChIP-seq analysis platform with customizable workflowsETO family protein Mtg16 regulates the balance of dendritic cell subsets by repressing Id2Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq dataImproving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological informationA generalized linear model for peak calling in ChIP-Seq data.Genome-wide localization of protein-DNA binding and histone modification by a Bayesian change-point method with ChIP-seq data.Universal count correction for high-throughput sequencing.TGF-β3-expressing CD4+CD25(-)LAG3+ regulatory T cells control humoral immune responsesCombining multiple ChIP-seq peak detection systems using combinatorial fusionCombined ChIP-Seq and transcriptome analysis identifies AP-1/JunD as a primary regulator of oxidative stress and IL-1β synthesis in macrophages.JunD/AP1 regulatory network analysis during macrophage activation in a rat model of crescentic glomerulonephritis.PolyaPeak: detecting transcription factor binding sites from ChIP-seq using peak shape information
P2860
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P2860
description
2009 nî lūn-bûn
@nan
2009 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年学术文章
@wuu
2009年学术文章
@zh-cn
2009年学术文章
@zh-hans
2009年学术文章
@zh-my
2009年学术文章
@zh-sg
2009年學術文章
@yue
name
BayesPeak: Bayesian analysis of ChIP-seq data.
@ast
BayesPeak: Bayesian analysis of ChIP-seq data.
@en
type
label
BayesPeak: Bayesian analysis of ChIP-seq data.
@ast
BayesPeak: Bayesian analysis of ChIP-seq data.
@en
prefLabel
BayesPeak: Bayesian analysis of ChIP-seq data.
@ast
BayesPeak: Bayesian analysis of ChIP-seq data.
@en
P2860
P356
P1433
P1476
BayesPeak: Bayesian analysis of ChIP-seq data.
@en
P2093
Christiana Spyrou
Simon Tavaré
P2860
P2888
P356
10.1186/1471-2105-10-299
P577
2009-09-21T00:00:00Z