Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays. - Wikidata - awgldk - TriplyDB

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

http://www.wikidata.org/entity/Q33610866

about

Microarrays, deep sequencing and the true measure of the transcriptome Response to “The Reality of Pervasive Transcription”Long noncoding RNAs: past, present, and future FusionSeq: a modular framework for finding gene fusions by analyzing Paired-End RNA-Sequencing data Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum The human transcriptome: an unfinished story A differential sequencing-based analysis of the C. elegans noncoding transcriptome Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project.RNA-Seq vs dual- and single-channel microarray data: sensitivity analysis for differential expression and clustering A method for detecting long non-coding RNAs with tiled RNA expression microarrays.Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data.New technologies accelerate the exploration of non-coding RNAs in horticultural plants.A comprehensive analysis of gene expression changes provoked by bacterial and fungal infection in C. elegans.The reality of pervasive transcription.Synthetic spike-in standards for RNA-seq experiments.Developmental transcriptome analysis of human erythropoiesis.Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing.Transcribed dark matter: meaning or myth?Transcriptomic complexity in young maize primary roots in response to low water potentials De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing.A comparison of methods for differential expression analysis of RNA-seq data A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.Flexible and efficient genome tiling design with penalized uniqueness score The transcriptional diversity of 25 Drosophila cell lines.Transcriptome analysis of the parasite Encephalitozoon cuniculi: an in-depth examination of pre-mRNA splicing in a reduced eukaryote The transcriptome of Leishmania major in the axenic promastigote stage: transcript annotation and relative expression levels by RNA-seq.Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.Human corneal epithelial subpopulations: oxygen dependent ex vivo expansion and transcriptional profiling.Functional genomic and proteomic analysis reveals disruption of myelin-related genes and translation in a mouse model of early life neglect The Caenorhabditis elegans intermediate-size transcriptome shows high degree of stage-specific expression.Transcriptome sequencing of mung bean (Vigna radiate L.) genes and the identification of EST-SSR markers.A preliminary study of the mechanism of nitrate-stimulated remarkable increase of rifamycin production in Amycolatopsis mediterranei U32 by RNA-seq.pre-miRNA profiles obtained through application of locked nucleic acids and deep sequencing reveals complex 5'/3' arm variation including concomitant cleavage and polyuridylation patterns Comprehensive evaluation of AmpliSeq transcriptome, a novel targeted whole transcriptome RNA sequencing methodology for global gene expression analysis.A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor.Cross-species Transcriptomic Comparison of In Vitro and In Vivo Mammalian Neural Cells.Transcriptomic buffering of cryptic genetic variation contributes to meningococcal virulence.Profiling of the silica-induced molecular events in lung epithelial cells using the RNA-Seq approach.Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots

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Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

http://www.wikidata.org/entity/Q33610866

description

2010 nî lūn-bûn

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2010 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունիսին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

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name

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@ast

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@en

type

label

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@ast

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@en

prefLabel

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@ast

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

@en

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Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays.

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Ashish Agarwal

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David Koppstein

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Ladeana W Hillier

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Lukas Habegger

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Rajkumar Sasidharan

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Robert H Waterston

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P2860

Transcript length bias in RNA-seq data confounds systems biology

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Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

RNA-Seq: a revolutionary tool for transcriptomics

The transcriptional landscape of the yeast genome defined by RNA sequencing

Mapping short DNA sequencing reads and calling variants using mapping quality scores

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

The transcriptional activity of human Chromosome 22

Statistical significance for genomewide studies

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10.1186/1471-2164-11-383

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Mark Bender Gerstein

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