Predicting nucleosome positioning using a duration Hidden Markov Model - Wikidata - awgldk - TriplyDB

Predicting nucleosome positioning using a duration Hidden Markov Model

Predicting nucleosome positioning using a duration Hidden Markov Model

http://www.wikidata.org/entity/Q33615372

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AVISPA: a web tool for the prediction and analysis of alternative splicing Mechanisms underlying epigenetic and transcriptional heterogeneity in Chinese hamster ovary (CHO) cell lines Dissecting epigenetic silencing complexity in the mouse lung cancer suppressor gene Cadm1 The methyltransferase SMYD3 mediates the recruitment of transcriptional cofactors at the myostatin and c-Met genes and regulates skeletal muscle atrophy Design of synthetic yeast promoters via tuning of nucleosome architecture.Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity Nucleosome positioning: resources and tools online.Repressive LTR nucleosome positioning by the BAF complex is required for HIV latency.High-density nucleosome occupancy map of human chromosome 9p21-22 reveals chromatin organization of the type I interferon gene cluster.Histone H2A (H2A.X and H2A.Z) variants in molluscs: molecular characterization and potential implications for chromatin dynamics.Dependence of the sperm/oocyte decision on the nucleosome remodeling factor complex was acquired during recent Caenorhabditis briggsae evolution Rare allelic forms of PRDM9 associated with childhood leukemogenesis.NSD1 mitigates caspase-1 activation by listeriolysin O in macrophages The chickpea genomic web resource: visualization and analysis of the desi-type Cicer arietinum nuclear genome for comparative exploration of legumes.Concomitant downregulation of the imprinted genes DLK1 and MEG3 at 14q32.2 by epigenetic mechanisms in urothelial carcinoma Regulatory mechanisms that prevent re-initiation of DNA replication can be locally modulated at origins by nearby sequence elements.Apoptotic lymphocytes of H. sapiens lose nucleosomes in GC-rich promoters.nuMap: a web platform for accurate prediction of nucleosome positioning Nucleosome occupancy reveals regulatory elements of the CFTR promoter.The development and characterization of synthetic minimal yeast promoters.An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.Nucleosome Presence at AML-1 Binding Sites Inversely Correlates with Ly49 Expression: Revelations from an Informatics Analysis of Nucleosomes and Immune Cell Transcription Factors.Structural features based genome-wide characterization and prediction of nucleosome organization.Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation.Synthetic Core Promoters as Universal Parts for Fine-Tuning Expression in Different Yeast Species High Precision DNA Modification Analysis of HCG9 in Major Psychosis.A deformation energy-based model for predicting nucleosome dyads and occupancy Chemical map of Schizosaccharomyces pombe reveals species-specific features in nucleosome positioning.The BAF complex and HIV latency.Nucleosome-specific, time-dependent changes in histone modifications during activation of the early growth response 1 (Egr1) gene.The SWI2/SNF2 chromatin remodeling ATPase BRAHMA represses abscisic acid responses in the absence of the stress stimulus in Arabidopsis.The Mi-2 homolog Mit1 actively positions nucleosomes within heterochromatin to suppress transcription.A genomic model of condition-specific nucleosome behavior explains transcriptional activity in yeast.Using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling.Cis-Regulatory Divergence in Gene Expression between Two Thermally Divergent Yeast Species.Nucleosomes affect local transformation efficiency.Unveiling combinatorial regulation through the combination of ChIP information and in silico cis-regulatory module detection.Concentration dependent chromatin states induced by the bicoid morphogen gradient Drosophila Model for the Analysis of Genesis of LIM-kinase 1-Dependent Williams-Beuren Syndrome Cognitive Phenotypes: INDELs, Transposable Elements of the Tc1/Mariner Superfamily and MicroRNAs.Promoter shape varies across populations and affects promoter evolution and expression noise.

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Predicting nucleosome positioning using a duration Hidden Markov Model

http://www.wikidata.org/entity/Q33615372

description

2010 nî lūn-bûn

@nan

2010 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունիսին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

@wuu

name

Predicting nucleosome positioning using a duration Hidden Markov Model

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Predicting nucleosome positioning using a duration Hidden Markov Model

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type

label

Predicting nucleosome positioning using a duration Hidden Markov Model

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Predicting nucleosome positioning using a duration Hidden Markov Model

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prefLabel

Predicting nucleosome positioning using a duration Hidden Markov Model

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Predicting nucleosome positioning using a duration Hidden Markov Model

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1471-2105-11-346

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BMC Bioinformatics

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Predicting nucleosome positioning using a duration Hidden Markov Model

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P2093

Jared Flatow

http://www.w3.org/2001/XMLSchema#string

Ji-Ping Wang

http://www.w3.org/2001/XMLSchema#string

Jonathan Widom

http://www.w3.org/2001/XMLSchema#string

Lei Xia

http://www.w3.org/2001/XMLSchema#string

Liqun Xi

http://www.w3.org/2001/XMLSchema#string

Yvonne Fondufe-Mittendorf

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P2860

A genomic code for nucleosome positioning

A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

Improved alignment of nucleosome DNA sequences using a mixture model.

Dynamic regulation of nucleosome positioning in the human genome

nuScore: a web-interface for nucleosome positioning predictions.

Genomic sequence is highly predictive of local nucleosome depletion.

Preferentially quantized linker DNA lengths in Saccharomyces cerevisiae.

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

A high-resolution atlas of nucleosome occupancy in yeast.

The DNA-encoded nucleosome organization of a eukaryotic genome.

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1471-2105-11-346

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10.1186/1471-2105-11-346

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11

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2010-06-24T00:00:00Z

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20576140

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