Genomic sequence is highly predictive of local nucleosome depletion.
about
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioningPredicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activitiesLinking genome to epigenomeMechanics of the IL2RA gene activation revealed by modeling and atomic force microscopyA library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promotersiNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical propertiesnuScore: a web-interface for nucleosome positioning predictions.Conservation and implications of eukaryote transcriptional regulatory regions across multiple species.Sequence-dependent DNA helical rise and nucleosome stability.Nucleosome positioning from tiling microarray data.Learning a weighted sequence model of the nucleosome core and linker yields more accurate predictions in Saccharomyces cerevisiae and Homo sapiens.Distinct modes of regulation by chromatin encoded through nucleosome positioning signalsThe impact of the nucleosome code on protein-coding sequence evolution in yeastTwo distinct modes of nucleosome modulation associated with different degrees of dependence of nucleosome positioning on the underlying DNA sequence.Transcriptional interaction-assisted identification of dynamic nucleosome positioningInsights into distinct regulatory modes of nucleosome positioning.G+C content dominates intrinsic nucleosome occupancyBlurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not localHigh-resolution nucleosome mapping reveals transcription-dependent promoter packaging.Nucleosome positioning by genomic excluding-energy barriers.Effects of Alu elements on global nucleosome positioning in the human genome.Genome-wide views of chromatin structurePredicting nucleosome positioning using a duration Hidden Markov ModelQuantitative test of the barrier nucleosome model for statistical positioning of nucleosomes up- and downstream of transcription start sitesPrediction of nucleosome positioning based on transcription factor binding sitesNucleosome positioning: how is it established, and why does it matter?Sequence-dependent histone variant positioning signaturesAnalysis of nucleosome positioning determined by DNA helix curvature in the human genome.The organization of nucleosomes around splice sites.Statistical methods for detecting periodic fragments in DNA sequence dataEvidence of association between nucleosome occupancy and the evolution of transcription factor binding sites in yeast.Nucleosome positioning: resources and tools online.A motif-independent metric for DNA sequence specificity.Nucleosome dynamics define transcriptional enhancers.A structural perspective on the where, how, why, and what of nucleosome positioning.Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast.Applications of alignment-free methods in epigenomicsHigh-throughput sequencing reveals a simple model of nucleosome energetics.Predicting the human epigenome from DNA motifs.Prediction of nucleosome rotational positioning in yeast and human genomes based on sequence-dependent DNA anisotropy.
P2860
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P2860
Genomic sequence is highly predictive of local nucleosome depletion.
description
2007 nî lūn-bûn
@nan
2007 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Genomic sequence is highly predictive of local nucleosome depletion.
@ast
Genomic sequence is highly predictive of local nucleosome depletion.
@en
Genomic sequence is highly predictive of local nucleosome depletion.
@nl
type
label
Genomic sequence is highly predictive of local nucleosome depletion.
@ast
Genomic sequence is highly predictive of local nucleosome depletion.
@en
Genomic sequence is highly predictive of local nucleosome depletion.
@nl
prefLabel
Genomic sequence is highly predictive of local nucleosome depletion.
@ast
Genomic sequence is highly predictive of local nucleosome depletion.
@en
Genomic sequence is highly predictive of local nucleosome depletion.
@nl
P2860
P1476
Genomic sequence is highly predictive of local nucleosome depletion.
@en
P2093
Guo-Cheng Yuan
P2860
P356
10.1371/JOURNAL.PCBI.0040013
P577
2007-12-13T00:00:00Z