PHAST and RPHAST: phylogenetic analysis with space/time models. - Wikidata - awgldk - TriplyDB

PHAST and RPHAST: phylogenetic analysis with space/time models.

PHAST and RPHAST: phylogenetic analysis with space/time models.

http://www.wikidata.org/entity/Q33806905

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De novo genesis of enhancers in vertebrates The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome High throughput sequencing approaches to mutation discovery in the mouse Ancestral Reconstruction Progress in methods for rare variant association Bat Accelerated Regions Identify a Bat Forelimb Specific Enhancer in the HoxD Locus Comparative genomics reveals insights into avian genome evolution and adaptation Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs Divergent evolutionary rates in vertebrate and mammalian specific conserved non-coding elements (CNEs) in echolocating mammals A primer for disease gene prioritization using next-generation sequencing data Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster Many human accelerated regions are developmental enhancers Parallelism and Epistasis in Skeletal Evolution Identified through Use of Phylogenomic Mapping Strategies A novel amyotrophic lateral sclerosis mutation in OPTN induces ER stress and Golgi fragmentation in vitro.A general framework for estimating the relative pathogenicity of human genetic variants Chemosensory adaptations of the mountain fly Drosophila nigrosparsa (Insecta: Diptera) through genomics' and structural biology's lenses.A new genome-wide method to track horizontally transferred sequences: application to Drosophila The UCSC Genome Browser database: 2015 update.Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park The Rice Paradox: Multiple Origins but Single Domestication in Asian Rice.Exonic splicing signals impose constraints upon the evolution of enzymatic activity.The Agassiz's desert tortoise genome provides a resource for the conservation of a threatened species.Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features.Whole-exome sequencing and its impact in hereditary hearing loss Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants.Next generation sequencing for molecular diagnosis of neuromuscular diseases.Genome-wide inference of natural selection on human transcription factor binding sites.Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura.An update on LNCipedia: a database for annotated human lncRNA sequences.A model-based analysis of GC-biased gene conversion in the human and chimpanzee genomes.Comparative genomic data of the Avian Phylogenomics Project.Substitution patterns are GC-biased in divergent sequences across the metazoans Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle.Systematic imaging reveals features and changing localization of mRNAs in Drosophila development Long non-coding RNA discovery across the genus anopheles reveals conserved secondary structures within and beyond the Gambiae complex.PAPST, a User Friendly and Powerful Java Platform for ChIP-Seq Peak Co-Localization Analysis and Beyond.Neurodevelopmental LincRNA Microsyteny Conservation and Mammalian Brain Size Evolution.Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development.Evolution of the unspliced transcriptome.Intersecting transcription networks constrain gene regulatory evolution

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PHAST and RPHAST: phylogenetic analysis with space/time models.

http://www.wikidata.org/entity/Q33806905

description

2010 nî lūn-bûn

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2010 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի դեկտեմբերին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

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2010年論文

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2010年论文

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name

PHAST and RPHAST: phylogenetic analysis with space/time models.

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PHAST and RPHAST: phylogenetic analysis with space/time models.

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PHAST and RPHAST: phylogenetic analysis with space/time models.

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PHAST and RPHAST: phylogenetic analysis with space/time models.

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PHAST and RPHAST: phylogenetic analysis with space/time models.

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PHAST and RPHAST: phylogenetic analysis with space/time models.

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Briefings in Bioinformatics

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PHAST and RPHAST: phylogenetic analysis with space/time models.

@en

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Katherine S Pollard

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Melissa J Hubisz

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P2860

Identification and classification of conserved RNA secondary structures in the human genome

Bioconductor: open software development for computational biology and bioinformatics

An RNA gene expressed during cortical development evolved rapidly in humans

Sequencing and comparison of yeast species to identify genes and regulatory elements

Molecular cloning and characterization of Kremen, a novel kringle-containing transmembrane protein

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

MONKEY: identifying conserved transcription-factor binding sites in multiple alignments using a binding site-specific evolutionary model

PAML 4: phylogenetic analysis by maximum likelihood

Sequencing and comparative analysis of a conserved syntenic segment in the Solanaceae

Galaxy: a platform for interactive large-scale genome analysis.

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41-51

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scholarly article

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10.1093/BIB/BBQ072

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1

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12

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