Identifying dispersed epigenomic domains from ChIP-Seq data.
about
Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylasePractical guidelines for the comprehensive analysis of ChIP-seq dataCell reprogramming requires silencing of a core subset of polycomb targetsRif1 maintains telomere length homeostasis of ESCs by mediating heterochromatin silencingGenome-wide mapping of histone H3K9me2 in acute myeloid leukemia reveals large chromosomal domains associated with massive gene silencing and sites of genome instability.Features that define the best ChIP-seq peak calling algorithmsCombinatorial epigenetic patterns as quantitative predictors of chromatin biology.Parsimonious higher-order hidden Markov models for improved array-CGH analysis with applications to Arabidopsis thaliana.WaveSeq: a novel data-driven method of detecting histone modification enrichments using wavelets.Library preparation and data analysis packages for rapid genome sequencingA novel Bayesian change-point algorithm for genome-wide analysis of diverse ChIPseq data typesAccounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data.Inferring nucleosome positions with their histone mark annotation from ChIP data.DNA methylation on N(6)-adenine in mammalian embryonic stem cells.Genome-wide chromatin and gene expression profiling during memory formation and maintenance in adult mice.PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq datagroHMM: a computational tool for identifying unannotated and cell type-specific transcription units from global run-on sequencing data.Identifying peaks in *-seq data using shape information.ChIP-seq Data Processing for PcG Proteins and Associated Histone Modifications.A MAD-Bayes Algorithm for State-Space Inference and Clustering with Application to Querying Large Collections of ChIP-Seq Data Sets.Characterising ChIP-seq binding patterns by model-based peak shape deconvolution.jMOSAiCS: joint analysis of multiple ChIP-seq datasets.Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcriptionAn integrated strategy for identification of both sharp and broad peaks from next-generation sequencing data.Spatial clustering for identification of ChIP-enriched regions (SICER) to map regions of histone methylation patterns in embryonic stem cells.The developmental potential of iPSCs is greatly influenced by reprogramming factor selectionIndependence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation.Genome-wide localization of protein-DNA binding and histone modification by a Bayesian change-point method with ChIP-seq data.ChIPnorm: a statistical method for normalizing and identifying differential regions in histone modification ChIP-seq libraries.Copy-number-aware differential analysis of quantitative DNA sequencing dataEpigenetic dysregulation by nickel through repressive chromatin domain disruption.A wavelet approach to detect enriched regions and explore epigenomic landscapes.The patterns of histone modifications in the vicinity of transcription factor binding sites in human lymphoblastoid cell lines.Genome-wide identification of chromatin transitional regions reveals diverse mechanisms defining the boundary of facultative heterochromatinEpigenetic modifications are associated with inter-species gene expression variation in primateshistoneHMM: Differential analysis of histone modifications with broad genomic footprints.Identifying differential transcription factor binding in ChIP-seq.Chromatin analyses of Zymoseptoria tritici: Methods for chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq).
P2860
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P2860
Identifying dispersed epigenomic domains from ChIP-Seq data.
description
2011 nî lūn-bûn
@nan
2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Identifying dispersed epigenomic domains from ChIP-Seq data.
@ast
Identifying dispersed epigenomic domains from ChIP-Seq data.
@en
type
label
Identifying dispersed epigenomic domains from ChIP-Seq data.
@ast
Identifying dispersed epigenomic domains from ChIP-Seq data.
@en
prefLabel
Identifying dispersed epigenomic domains from ChIP-Seq data.
@ast
Identifying dispersed epigenomic domains from ChIP-Seq data.
@en
P2860
P356
P1433
P1476
Identifying dispersed epigenomic domains from ChIP-Seq data.
@en
P2860
P304
P356
10.1093/BIOINFORMATICS/BTR030
P407
P577
2011-02-16T00:00:00Z