about
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciencesA genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio choleraeWeakly positioned nucleosomes enhance the transcriptional competency of chromatinEvaluation of algorithm performance in ChIP-seq peak detectionHuman genetics and genomics a decade after the release of the draft sequence of the human genomeWhole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolutionA comparison of peak callers used for DNase-Seq dataPractical guidelines for the comprehensive analysis of ChIP-seq dataGenome-wide characterization of adaptation and speciation in tiger swallowtail butterflies using de novo transcriptome assembliesFrom RNA-seq reads to differential expression resultsTranscript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationTranscriptome Analysis in Domesticated Species: Challenges and StrategiesCircadian systems biology: When time mattersMicroRNAs as biomarkers for CNS diseaseRNA-Seq Differentiates Tumour and Host mRNA Expression Changes Induced by Treatment of Human Tumour Xenografts with the VEGFR Tyrosine Kinase Inhibitor CediranibThe Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing dataIntegrating Epigenomics into the Understanding of Biomedical InsightComputational characterisation of cancer molecular profiles derived using next generation sequencingProtein-DNA binding in high-resolutionChIP-seq guidelines and practices of the ENCODE and modENCODE consortiaUsing galaxy to perform large-scale interactive data analysesIntegrative biological analysis for neuropsychopharmacologyGenome-wide signatures of transcription factor activity: connecting transcription factors, disease, and small moleculesEWS and FUS bind a subset of transcribed genes encoding proteins enriched in RNA regulatory functionsDistinct roles of KAP1, HP1 and G9a/GLP in silencing of the two-cell-specific retrotransposon MERVL in mouse ES cellsComputational analysis of bacterial RNA-Seq dataApplications of next generation sequencing in molecular ecology of non-model organismsPAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyondIntegration of metabolism and virulence by Clostridium difficile CodYMUSIC: identification of enriched regions in ChIP-Seq experiments using a mappability-corrected multiscale signal processing framework.A co-localization model of paired ChIP-seq data using a large ENCODE data set enables comparison of multiple samples.QUANTIFYING ALTERNATIVE SPLICING FROM PAIRED-END RNA-SEQUENCING DATAChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.MaSC: mappability-sensitive cross-correlation for estimating mean fragment length of single-end short-read sequencing dataComparative annotation of functional regions in the human genome using epigenomic dataMultiple suboptimal solutions for prediction rules in gene expression data.NEXT-peak: a normal-exponential two-peak model for peak-calling in ChIP-seq data.Identification of transcription factor binding sites from ChIP-seq data at high resolution.Peak Finder Metaserver - a novel application for finding peaks in ChIP-seq data.Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data.
P2860
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P2860
description
2009 nî lūn-bûn
@nan
2009 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Computation for ChIP-seq and RNA-seq studies
@ast
Computation for ChIP-seq and RNA-seq studies
@en
type
label
Computation for ChIP-seq and RNA-seq studies
@ast
Computation for ChIP-seq and RNA-seq studies
@en
prefLabel
Computation for ChIP-seq and RNA-seq studies
@ast
Computation for ChIP-seq and RNA-seq studies
@en
P2093
P2860
P356
P1433
P1476
Computation for ChIP-seq and RNA-seq studies
@en
P2093
Ali Mortazavi
Barbara Wold
Shirley Pepke
P2860
P2888
P304
P356
10.1038/NMETH.1371
P433
P577
2009-11-01T00:00:00Z
P5875
P6179
1011651858