Hal: an automated pipeline for phylogenetic analyses of genomic data
about
Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new speciesGenome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absentComparative and phylogenomic evidence that the alphaproteobacterium HIMB59 is not a member of the oceanic SAR11 cladeThe genome of Eucalyptus grandisStructural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102.The genome of tolypocladium inflatum: evolution, organization, and expression of the cyclosporin biosynthetic gene clusterEctomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 cladeStreamlining and core genome conservation among highly divergent members of the SAR11 cladeMutualistic co-evolution of type III effector genes in Sinorhizobium fredii and Bradyrhizobium japonicumWhole genome annotation and comparative genomic analyses of bio-control fungus Purpureocillium lilacinumThe genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibioticsPhylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land PlantsBuilding a phylogenomic pipeline for the eukaryotic tree of life - addressing deep phylogenies with genome-scale dataBIR Pipeline for Preparation of Phylogenomic Data.Gibberellin deficiency is responsible for shy-flowering nature of Epipremnum aureum.Single-cell enabled comparative genomics of a deep ocean SAR11 bathytypeOne carbon metabolism in SAR11 pelagic marine bacteriaComparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactionsUse of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus.Synechococcus: 3 billion years of global dominance.De novo transcriptome sequencing and analysis for Venturia inaequalis, the devastating apple scab pathogenComparative genomic analysis of six bacteria belonging to the genus Novosphingobium: insights into marine adaptation, cell-cell signaling and bioremediation.Workflow management systems for gene sequence analysis and evolutionary studies - A Review.Comparative genomic analysis indicates that niche adaptation of terrestrial Flavobacteria is strongly linked to plant glycan metabolism.Mitochondrial genome of Phlebia radiata is the second largest (156 kbp) among fungi and features signs of genome flexibility and recent recombination events.Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria-rich microbiome.SAR11 lipid renovation in response to phosphate starvation.Comprehensive Genomic Analyses of the OM43 Clade, Including a Novel Species from the Red Sea, Indicate Ecotype Differentiation among Marine Methylotrophs.Transcriptome Analysis of the Emerald Ash Borer (EAB), Agrilus planipennis: De Novo Assembly, Functional Annotation and Comparative Analysis.The Genome of Winter Moth (Operophtera brumata) Provides a Genomic Perspective on Sexual Dimorphism and Phenology.De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia.Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement.The Complete Sequence and Comparative Analysis of a Multidrug-Resistance and Virulence Multireplicon IncFII Plasmid pEC302/04 from an Extraintestinal Pathogenic Escherichia coli EC302/04 Indicate Extensive Diversity of IncFII PlasmidsComparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergenceDiscovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea.Proteomic and transcriptomic analyses of "Candidatus Pelagibacter ubique" describe the first PII-independent response to nitrogen limitation in a free-living AlphaproteobacteriumPhylogenomic test of the hypotheses for the evolutionary origin of eukaryotes.SAR202 Genomes from the Dark Ocean Predict Pathways for the Oxidation of Recalcitrant Dissolved Organic Matter.Reconciliation of gene and species trees.
P2860
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P2860
Hal: an automated pipeline for phylogenetic analyses of genomic data
description
2011 nî lūn-bûn
@nan
2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Hal: an automated pipeline for phylogenetic analyses of genomic data
@ast
Hal: an automated pipeline for phylogenetic analyses of genomic data
@en
type
label
Hal: an automated pipeline for phylogenetic analyses of genomic data
@ast
Hal: an automated pipeline for phylogenetic analyses of genomic data
@en
prefLabel
Hal: an automated pipeline for phylogenetic analyses of genomic data
@ast
Hal: an automated pipeline for phylogenetic analyses of genomic data
@en
P2093
P2860
P356
P1433
P1476
Hal: an automated pipeline for phylogenetic analyses of genomic data
@en
P2093
Barbara Robbertse
John Reeves
Joseph W Spatafora
Ryan J Yoder
P2860
P304
P356
10.1371/CURRENTS.RRN1213
P577
2011-02-07T00:00:00Z