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A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site predictionMotif analysis unveils the possible co-regulation of chloroplast genes and nuclear genes encoding chloroplast proteinsReliable prediction of transcription factor binding sites by phylogenetic verificationAn improved map of conserved regulatory sites for Saccharomyces cerevisiae.SIOMICS: a novel approach for systematic identification of motifs in ChIP-seq data.A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data.Prediction of transcription factor binding sites using ChIP-chip and phylogenetic footprinting data.Practical strategies for discovering regulatory DNA sequence motifs.Bounded search for de novo identification of degenerate cis-regulatory elements.A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factorsCombining comparative genomics with de novo motif discovery to identify human transcription factor DNA-binding motifsExtensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tractModeling an evolutionary conserved circadian cis-elementc-REDUCE: incorporating sequence conservation to detect motifs that correlate with expression.Alignment and prediction of cis-regulatory modules based on a probabilistic model of evolution.The effect of orthology and coregulation on detecting regulatory motifs.Systematic identification of conserved motif modules in the human genome.An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes.An algorithmic perspective of de novo cis-regulatory motif finding based on ChIP-seq data.Integrative analyses shed new light on human ribosomal protein gene regulation.Genome-wide de novo prediction of cis-regulatory binding sites in prokaryotes.Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequencesMotifMap: a human genome-wide map of candidate regulatory motif sitesHigh-resolution computational models of genome binding events.Systematic prediction of cis-regulatory elements in the Chlamydomonas reinhardtii genome using comparative genomics.Heterogeneity in DNA multiple alignments: modeling, inference, and applications in motif finding.
P2860
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P2860
description
2005 nî lūn-bûn
@nan
2005 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Sampling motifs on phylogenetic trees.
@ast
Sampling motifs on phylogenetic trees.
@en
type
label
Sampling motifs on phylogenetic trees.
@ast
Sampling motifs on phylogenetic trees.
@en
prefLabel
Sampling motifs on phylogenetic trees.
@ast
Sampling motifs on phylogenetic trees.
@en
P2860
P356
P1476
Sampling motifs on phylogenetic trees.
@en
P2093
Wing H Wong
Xiaoman Li
P2860
P304
P356
10.1073/PNAS.0501620102
P407
P577
2005-06-27T00:00:00Z