Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems.
about
AID/APOBEC cytosine deaminase induces genome-wide kataegisProtein and DNA modifications: evolutionary imprints of bacterial biochemical diversification and geochemistry on the provenance of eukaryotic epigeneticsBacterial contact-dependent growth inhibitionThe BC component of ABC toxins is an RHS-repeat-containing protein encapsulation deviceSulphur shuttling across a chaperone during molybdenum cofactor maturationRhs proteins from diverse bacteria mediate intercellular competitionA new family of secreted toxins in pathogenic Neisseria species.Identification of novel components of NAD-utilizing metabolic pathways and prediction of their biochemical functions.New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing.Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing.Reduced local mutation density in regulatory DNA of cancer genomes is linked to DNA repair.Molecular evolution of pentatricopeptide repeat genes reveals truncation in species lacking an editing target and structural domains under distinct selective pressuresPolymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomicsMissing genes, multiple ORFs, and C-to-U type RNA editing in Acrasis kona (Heterolobosea, Excavata) mitochondrial DNA.Gene flow and biological conflict systems in the origin and evolution of eukaryotes.Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA.Cytidine deaminase motifs within the DYW domain of two pentatricopeptide repeat-containing proteins are required for site-specific chloroplast RNA editing.Resilience of biochemical activity in protein domains in the face of structural divergence.The natural history of ADP-ribosyltransferases and the ADP-ribosylation system.A conserved glutamate residue in the C-terminal deaminase domain of pentatricopeptide repeat proteins is required for RNA editing activity.The eukaryotic translation initiation regulator CDC123 defines a divergent clade of ATP-grasp enzymes with a predicted role in novel protein modificationsType VI secretion systems of human gut Bacteroidales segregate into three genetic architectures, two of which are contained on mobile genetic elementsTransposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectorsRNA damage in biological conflicts and the diversity of responding RNA repair systemsA genome-wide identification and analysis of the DYW-deaminase genes in the pentatricopeptide repeat gene family in cotton (Gossypium spp.).Polyvalent Proteins, a Pervasive Theme in the Intergenomic Biological Conflicts of Bacteriophages and Conjugative Elements.A PPR protein in the PLS subfamily stabilizes the 5'-end of processed rpl16 mRNAs in maize chloroplasts.A survey of PPR proteins identifies DYW domains like those of land plant RNA editing factors in diverse eukaryotes.Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains.Conflict RNA modification, host-parasite co-evolution, and the origins of DNA and DNA-binding proteins1.A-to-I editing on tRNAs: biochemical, biological and evolutionary implications.A Single-Target Mitochondrial RNA Editing Factor of Funaria hygrometrica Can Fully Reconstitute RNA Editing at Two Sites in Physcomitrella patens.Importance of adenosine-to-inosine editing adjacent to the anticodon in an Arabidopsis alanine tRNA under environmental stress.When the Scaffold Cannot Be Ignored: The Role of the Hydrophobic Core in Ligand Binding and Specificity.Chloroplast RNA editing going extreme: more than 3400 events of C-to-U editing in the chloroplast transcriptome of the lycophyte Selaginella uncinata.A protein with an unusually short PPR domain, MEF8, affects editing at over 60 Arabidopsis mitochondrial C targets of RNA editing.Two interacting proteins are necessary for the editing of the NdhD-1 site in Arabidopsis plastids.A DYW-protein knockout in Physcomitrella affects two closely spaced mitochondrial editing sites and causes a severe developmental phenotype.Identification of enzymes for adenosine-to-inosine editing and discovery of cytidine-to-uridine editing in nucleus-encoded transfer RNAs of Arabidopsis.Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria.
P2860
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P2860
Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems.
description
2011 nî lūn-bûn
@nan
2011 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Evolution of the deaminase fol ...... from bacterial toxin systems.
@ast
Evolution of the deaminase fol ...... from bacterial toxin systems.
@en
Evolution of the deaminase fol ...... from bacterial toxin systems.
@nl
type
label
Evolution of the deaminase fol ...... from bacterial toxin systems.
@ast
Evolution of the deaminase fol ...... from bacterial toxin systems.
@en
Evolution of the deaminase fol ...... from bacterial toxin systems.
@nl
prefLabel
Evolution of the deaminase fol ...... from bacterial toxin systems.
@ast
Evolution of the deaminase fol ...... from bacterial toxin systems.
@en
Evolution of the deaminase fol ...... from bacterial toxin systems.
@nl
P2860
P50
P356
P1476
Evolution of the deaminase fol ...... from bacterial toxin systems.
@en
P2093
Lakshminarayan M Iyer
P2860
P304
P356
10.1093/NAR/GKR691
P407
P577
2011-09-03T00:00:00Z