Simplified RNA secondary structure mapping by automation of SHAPE data analysis. - Wikidata - awgldk - TriplyDB

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

http://www.wikidata.org/entity/Q34037489

about

Automated 3D structure composition for large RNAs HiTRACE-Web: an online tool for robust analysis of high-throughput capillary electrophoresis CentroidAlign-Web: A Fast and Accurate Multiple Aligner for Long Non-Coding RNAs Direct updating of an RNA base-pairing probability matrix with marginal probability constraints A magnesium-induced RNA conformational switch at the internal ribosome entry site of hepatitis C virus genome visualized by atomic force microscopy Computational analysis of RNA structures with chemical probing data.RiboCAT: a new capillary electrophoresis data analysis tool for nucleic acid probing.Establishment and Application of a High Throughput Screening System Targeting the Interaction between HCV Internal Ribosome Entry Site and Human Eukaryotic Translation Initiation Factor 3.Hepatitis delta antigen requires a flexible quasi-double-stranded RNA structure to bind and condense hepatitis delta virus RNA in a ribonucleoprotein complex.High-throughput mutate-map-rescue evaluates SHAPE-directed RNA structure and uncovers excited states.RNA secondary structure prediction using high-throughput SHAPE RNA Interference-Guided Targeting of Hepatitis C Virus Replication with Antisense Locked Nucleic Acid-Based Oligonucleotides Containing 8-oxo-dG Modifications.Automated band annotation for RNA structure probing experiments with numerous capillary electrophoresis profiles QuShape: rapid, accurate, and best-practices quantification of nucleic acid probing information, resolved by capillary electrophoresis.Computational analysis of conserved RNA secondary structure in transcriptomes and genomes.Fingerprinting the junctions of RNA structure by an open-paddlewheel diruthenium compound.A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication.Compartmentalization of hepatitis C virus variants in patients with hepatocellular carcinoma.Conserved RNA secondary structures and long-range interactions in hepatitis C viruses.In virio SHAPE analysis of tRNA(Lys3) annealing to HIV-1 genomic RNA in wild type and protease-deficient virus.Annealing to sequences within the primer binding site loop promotes an HIV-1 RNA conformation favoring RNA dimerization and packaging.The folding of the hepatitis C virus internal ribosome entry site depends on the 3'-end of the viral genome.Determination of in vivo RNA structure in low-abundance transcripts.New windows into retroviral RNA structures.

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Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

http://www.wikidata.org/entity/Q34037489

description

2011 nî lūn-bûn

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2011 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

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2011年论文

@wuu

name

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@ast

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@en

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@nl

type

label

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@ast

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@en

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@nl

prefLabel

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@ast

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@en

Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@nl

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Nucleic Acids Research

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Simplified RNA secondary structure mapping by automation of SHAPE data analysis.

@en

P2093

Edward A Pham

http://www.w3.org/2001/XMLSchema#string

Jeffrey S Glenn

http://www.w3.org/2001/XMLSchema#string

Menashe Elazar

http://www.w3.org/2001/XMLSchema#string

Phillip S Pang

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P2860

Architecture and secondary structure of an entire HIV-1 RNA genome

Evidence for a new hepatitis C virus antigen encoded in an overlapping reading frame

Accurate SHAPE-directed RNA structure determination

DMS footprinting of structured RNAs and RNA-protein complexes

Evidence for a functional RNA element in the hepatitis C virus core gene

Mutation Master: profiles of substitutions in hepatitis C virus RNA of the core, alternate reading frame, and NS2 coding regions.

Thermodynamic and phylogenetic prediction of RNA secondary structures in the coding region of hepatitis C virus

Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence.

Internal Initiation Stimulates Production of p8 Minicore, a Member of a Newly Discovered Family of Hepatitis C Virus Core Protein Isoforms

Conformational inhibition of the hepatitis C virus internal ribosome entry site RNA

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e151

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scholarly article

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10.1093/NAR/GKR773

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22

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39

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2011-09-30T00:00:00Z

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51686857

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21965531

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3239176

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