Evaluation of subsampling-based normalization strategies for tagged high-throughput sequencing data sets from gut microbiomes
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Bioinformatic approaches for functional annotation and pathway inference in metagenomics dataMoth outbreaks alter root-associated fungal communities in subarctic mountain birch forests.RUMINANT NUTRITION SYMPOSIUM: How to use data on the rumen microbiome to improve our understanding of ruminant nutrition.Response of leaf endophytic bacterial community to elevated CO2 at different growth stages of rice plant.myPhyloDB: a local web server for the storage and analysis of metagenomic data.Normalization and microbial differential abundance strategies depend upon data characteristics.Plant Communities Rather than Soil Properties Structure Arbuscular Mycorrhizal Fungal Communities along Primary Succession on a Mine Spoil.Weaning age influences the severity of gastrointestinal microbiome shifts in dairy calves.Metabarcoding monitoring analysis: the pros and cons of using co-extracted environmental DNA and RNA data to assess offshore oil production impacts on benthic communitiesQuantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiomeStability and phylogenetic correlation in gut microbiota: lessons from ants and apes.Microbiome diversity of Aphis glycines with extensive superinfection in native and invasive populations.Considering external information to improve the phylogenetic comparison of microbial communities: a new approach based on constrained Double Principal Coordinates Analysis (cDPCoA).Anthropogenic land use shapes the composition and phylogenetic structure of soil arbuscular mycorrhizal fungal communities.The composition of arbuscular mycorrhizal fungal communities in the roots of a ruderal forb is not related to the forest fragmentation process.The composition of arbuscular mycorrhizal fungal communities differs among the roots, spores and extraradical mycelia associated with five Mediterranean plant species.Navigating the labyrinth: a guide to sequence-based, community ecology of arbuscular mycorrhizal fungi.FUNGAL SYMBIONTS. Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism.High-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystemsComposition and Interactions among Bacterial, Microeukaryotic, and T4-like Viral Assemblages in Lakes from Both Polar ZonesImpact of alien pines on local arbuscular mycorrhizal fungal communities-evidence from two continents.Land-use intensity and host plant simultaneously shape the composition of arbuscular mycorrhizal fungal communities in a Mediterranean drained peatland.Expanding the UniFrac ToolboxUnique vaginal microbiota that includes an unknown Mycoplasma-like organism is associated with Trichomonas vaginalis infectionDevelopment of Ruminal and Fecal Microbiomes Are Affected by Weaning But Not Weaning Strategy in Dairy CalvesColonic microbiota can promote rapid local improvement of murine colitis by thioguanine independently of T lymphocytes and host metabolism.Nutritional Models of Experimentally-Induced Subacute Ruminal Acidosis (SARA) Differ in Their Impact on Rumen and Hindgut Bacterial Communities in Dairy Cows.Optimization of DNA extraction for advancing coral microbiota investigations.Changes in Microbiota in Rumen Digesta and Feces Due to a Grain-Based Subacute Ruminal Acidosis (SARA) Challenge.Plants Assemble Species Specific Bacterial Communities from Common Core Taxa in Three Arcto-Alpine Climate Zones.Arbuscular mycorrhizal fungi communities from tropical Africa reveal strong ecological structure.Diversity of root-associated arbuscular mycorrhizal fungal communities in a rubber tree plantation chronosequence in Northeast Thailand.The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles.Strong Regionality and Dominance of Anaerobic Bacterial Taxa Characterize Diazotrophic Bacterial Communities of the Arcto-Alpine Plant Species Oxyria digyna and Saxifraga oppositifolia.
P2860
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P2860
Evaluation of subsampling-based normalization strategies for tagged high-throughput sequencing data sets from gut microbiomes
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2011 nî lūn-bûn
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2011 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հոտեմբերին հրատարակված գիտական հոդված
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2011年の論文
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年學術文章
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Evaluation of subsampling-base ...... data sets from gut microbiomes
@ast
Evaluation of subsampling-base ...... data sets from gut microbiomes
@en
Evaluation of subsampling-base ...... data sets from gut microbiomes
@nl
type
label
Evaluation of subsampling-base ...... data sets from gut microbiomes
@ast
Evaluation of subsampling-base ...... data sets from gut microbiomes
@en
Evaluation of subsampling-base ...... data sets from gut microbiomes
@nl
prefLabel
Evaluation of subsampling-base ...... data sets from gut microbiomes
@ast
Evaluation of subsampling-base ...... data sets from gut microbiomes
@en
Evaluation of subsampling-base ...... data sets from gut microbiomes
@nl
P2860
P50
P356
P1476
Evaluation of subsampling-base ...... data sets from gut microbiomes
@en
P2093
Chris McSweeney
P2860
P304
P356
10.1128/AEM.05491-11
P407
P577
2011-10-07T00:00:00Z