The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
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Global analysis of riboswitches by small-angle X-ray scattering and calorimetryMolecular recognition and function of riboswitchesRecognition of S-adenosylmethionine by riboswitchesInsights into Metalloregulation by M-box Riboswitch RNAs via Structural Analysis of Manganese-Bound ComplexesComparison of a PreQ1 Riboswitch Aptamer in Metabolite-bound and Free States with Implications for Gene RegulationMolecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selectionMetabolite recognition principles and molecular mechanisms underlying riboswitch functionDetermining RNA three-dimensional structures using low-resolution data.Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution.Predicting RNA 3D structure using a coarse-grain helix-centered modelConsistent global structures of complex RNA states through multidimensional chemical mapping.RNA structure determination using SAXS data.Analysis of riboswitch structure and ligand binding using small-angle X-ray scattering (SAXS)Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding.Cotranscriptional folding of a riboswitch at nucleotide resolution.Selective 2'-hydroxyl acylation analyzed by protection from exoribonuclease.ATP-independent reversal of a membrane protein aggregate by a chloroplast SRP subunitClustering to identify RNA conformations constrained by secondary structureRiboswitches: discovery of drugs that target bacterial gene-regulatory RNAs.Folding energy landscape of the thiamine pyrophosphate riboswitch aptamerMultiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy.Allosteric tertiary interactions preorganize the c-di-GMP riboswitch and accelerate ligand binding.Nucleic acid structure characterization by small angle X-ray scattering (SAXS)The expression platform and the aptamer: cooperativity between Mg2+ and ligand in the SAM-I riboswitch.Wide-angle X-ray solution scattering for protein-ligand binding: multivariate curve resolution with Bayesian confidence intervals.Riboswitch function: flipping the switch or tuning the dimmer?A personal perspective on chemistry-driven RNA research.Emerging applications of small angle solution scattering in structural biology.Probing riboswitch-ligand interactions using thiamine pyrophosphate analogues.Comparison of solution and crystal structures of preQ1 riboswitch reveals calcium-induced changes in conformation and dynamics.Progress and Current Challenges in Modeling Large RNAs.Three-dimensional structure of the 3'X-tail of hepatitis C virus RNA in monomeric and dimeric states.Rationalization and prediction of selective decoding of pseudouridine-modified nonsense and sense codons.Tetracycline determines the conformation of its aptamer at physiological magnesium concentrations.The apo riboswitch as a molecular hydra.Fingerprinting noncanonical and tertiary RNA structures by differential SHAPE reactivity.Predicting translational diffusion of evolutionary conserved RNA structures by the nucleotide number.Single-molecule FRET studies on the cotranscriptional folding of a thiamine pyrophosphate riboswitch.Gold nanocrystal labels provide a sequence-to-3D structure map in SAXS reconstructions.
P2860
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P2860
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
description
2009 nî lūn-bûn
@nan
2009 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@ast
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@en
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@nl
type
label
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@ast
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@en
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@nl
prefLabel
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@ast
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@en
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@nl
P2093
P2860
P1476
The ligand-free state of the TPP riboswitch: a partially folded RNA structure.
@en
P2093
Daniel Herschlag
Soenke Seifert
P2860
P304
P356
10.1016/J.JMB.2009.11.030
P407
P577
2009-11-17T00:00:00Z