Widespread selection for local RNA secondary structure in coding regions of bacterial genes.
about
A periodic pattern of mRNA secondary structure created by the genetic codeOverlapping codes within protein-coding sequencesEvidence of a novel RNA secondary structure in the coding region of HIV-1 pol geneStructured RNAs in the ENCODE selected regions of the human genomeA combinatorial code for splicing silencing: UAGG and GGGG motifsTranscriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expressionStrong purifying selection at synonymous sites in D. melanogasterEvidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammalsStatistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs.Large-scale structural analysis of the core promoter in mammalian and plant genomesFolding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast.DNA sequences shaped by selection for stability.Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence.Regulating highly dynamic unstructured proteins and their coding mRNAsSelection acts on DNA secondary structures to decrease transcriptional mutagenesisComputational prediction of splicing regulatory elements shared by Tetrapoda organismsMultiple mechanisms promote the retained expression of gene duplicates in the tetraploid frog Xenopus laevis.How the Sequence of a Gene Specifies Structural Symmetry in Proteins.Foundations for engineering biology.In silico genetic robustness analysis of microRNA secondary structures: potential evidence of congruent evolution in microRNAStem-loop structures in prokaryotic genomesA machine learning strategy to identify candidate binding sites in human protein-coding sequenceConsiderations in the identification of functional RNA structural elements in genomic alignmentsComparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions.Pre-mRNA secondary structures influence exon recognition.Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteinsGenomic mid-range inhomogeneity correlates with an abundance of RNA secondary structuresConserved secondary structures in Aspergillus.Conflicting selection pressures on synonymous codon use in yeast suggest selection on mRNA secondary structuresThe impact of the nucleosome code on protein-coding sequence evolution in yeastAlu exonization events reveal features required for precise recognition of exons by the splicing machineryA universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes.Increased incidence of rare codon clusters at 5' and 3' gene termini: implications for function.Translation efficiency is determined by both codon bias and folding energy.Assessing diversity of DNA structure-related sequence features in prokaryotic genomesPrediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data.Analysis of tetra- and hepta-nucleotides motifs promoting -1 ribosomal frameshifting in Escherichia coli.Reduced stability of mRNA secondary structure near the translation-initiation site in dsDNA viruses.Expression levels influence ribosomal frameshifting at the tandem rare arginine codons AGG_AGG and AGA_AGA in Escherichia coliThe surprising negative correlation of gene length and optimal codon use--disentangling translational selection from GC-biased gene conversion in yeast.
P2860
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P2860
Widespread selection for local RNA secondary structure in coding regions of bacterial genes.
description
2003 nî lūn-bûn
@nan
2003 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Widespread selection for local ...... ng regions of bacterial genes.
@ast
Widespread selection for local ...... ng regions of bacterial genes.
@en
Widespread selection for local ...... ng regions of bacterial genes.
@nl
type
label
Widespread selection for local ...... ng regions of bacterial genes.
@ast
Widespread selection for local ...... ng regions of bacterial genes.
@en
Widespread selection for local ...... ng regions of bacterial genes.
@nl
prefLabel
Widespread selection for local ...... ng regions of bacterial genes.
@ast
Widespread selection for local ...... ng regions of bacterial genes.
@en
Widespread selection for local ...... ng regions of bacterial genes.
@nl
P2860
P356
P1433
P1476
Widespread selection for local ...... ng regions of bacterial genes.
@en
P2093
Christopher B Burge
P2860
P304
P356
10.1101/GR.1257503
P577
2003-09-01T00:00:00Z