Revisiting global gene expression analysis - Wikidata - awgldk - TriplyDB

Revisiting global gene expression analysis

Revisiting global gene expression analysis

http://www.wikidata.org/entity/Q34308389

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Awakened by cellular stress: isolation and characterization of a novel population of pluripotent stem cells derived from human adipose tissue Proportionality: a valid alternative to correlation for relative data Defining functional DNA elements in the human genome The Quest for Targets Executing MYC-Dependent Cell Transformation Design and computational analysis of single-cell RNA-sequencing experiments Big Data Analytics in Healthcare.MicroRNA regulation of T-lymphocyte immunity: modulation of molecular networks responsible for T-cell activation, differentiation, and development Guidelines for the design, analysis and interpretation of 'omics' data: focus on human endometrium The legacy of diploid progenitors in allopolyploid gene expression patterns Chromatin loops as allosteric modulators of enhancer-promoter interactions X chromosome inactivation and active X upregulation in therian mammals: facts, questions, and hypotheses Functions of BET proteins in erythroid gene expression c-MYC Generates Repair Errors via Increased Transcription of Alternative-NHEJ Factors, LIG3 and PARP1, in Tyrosine Kinase-Activated Leukemias Inference of quantitative models of bacterial promoters from time-series reporter gene data Transcriptome response to elevated atmospheric CO2 concentration in the Formosan subterranean termite, Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae)Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli Identifying stably expressed genes from multiple RNA-Seq data sets MMDiff: quantitative testing for shape changes in ChIP-Seq data sets Normalization of RNA-sequencing data from samples with varying mRNA levels Deciphering global signal features of high-throughput array data from cancers.Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization.Variation-preserving normalization unveils blind spots in gene expression profiling.Normalization of RNA-seq data using factor analysis of control genes or samples The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance Measuring differential gene expression with RNA-seq: challenges and strategies for data analysis.RNA-seq Data: Challenges in and Recommendations for Experimental Design and Analysis.Improving small RNA-seq by using a synthetic spike-in set for size-range quality control together with a set for data normalization.Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression Data quantro: a data-driven approach to guide the choice of an appropriate normalization method Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment.mapDIA: Preprocessing and statistical analysis of quantitative proteomics data from data independent acquisition mass spectrometry CircNet: a database of circular RNAs derived from transcriptome sequencing data Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster.How should we measure proportionality on relative gene expression data?Identifying network-based biomarkers of complex diseases from high-throughput data.ICN: a normalization method for gene expression data considering the over-expression of informative genes.ChIP-Seq Data Analysis to Define Transcriptional Regulatory Networks.The application of transcriptional blood signatures to enhance our understanding of the host response to infection: the example of tuberculosis.Global transcriptional and translational repression in human-embryonic-stem-cell-derived Rett syndrome neurons.Gene expression in teratogenic exposures: a new approach to understanding individual risk.

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Revisiting global gene expression analysis

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2012 nî lūn-bûn

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2012 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2012 թվականի հոտեմբերին հրատարակված գիտական հոդված

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Revisiting global gene expression analysis

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Revisiting global gene expression analysis

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Alla A Sigova

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Charles Y Lin

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Christopher B Burge

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Tong Ihn Lee

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P2860

Mapping and quantifying mammalian transcriptomes by RNA-Seq

RNA-Seq: a revolutionary tool for transcriptomics

Integrative analysis of the melanoma transcriptome

Comprehensive molecular characterization of human colon and rectal cancer

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

Gene expression profiling predicts clinical outcome of breast cancer

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