Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression - Wikidata - awgldk - TriplyDB

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

http://www.wikidata.org/entity/Q34324095

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Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators NMD resulting from encephalomyocarditis virus IRES-directed translation initiation seems to be restricted to CBP80/20-bound mRNA Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana Global analysis of alternative splicing differences between humans and chimpanzees Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions Impacts of Alternative Splicing Events on the Differentiation of Adipocytes Dynamic integration of splicing within gene regulatory pathways Should pharmacologists care about alternative splicing? IUPHAR Review 4 Nonsense-mediated mRNA decay in humans at a glance Introns in UTRs: why we should stop ignoring them 5-lipoxygenase mRNA and protein isoforms Genome-wide analysis of immune activation in human T and B cells reveals distinct classes of alternatively spliced genes The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana Ligand-independent androgen receptor variants derived from splicing of cryptic exons signify hormone-refractory prostate cancer Global profiling and molecular characterization of alternative splicing events misregulated in lung cancer.New insights from existing sequence data: generating breakthroughs without a pipette Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1 Conserved and species-specific alternative splicing in mammalian genomes.Strategies for identifying RNA splicing regulatory motifs and predicting alternative splicing events Nonsense-mediated mRNA decay impacts MSI-driven carcinogenesis and anti-tumor immunity in colorectal cancers.Implication of the F-Box Protein FBXL21 in circadian pacemaker function in mammals.Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila.Stochastic noise in splicing machinery Genome-wide mapping of alternative splicing in Arabidopsis thaliana Transcripts expressed using a bicistronic vector pIREShyg2 are sensitized to nonsense-mediated mRNA decay.A global comparison between nuclear and cytosolic transcriptomes reveals differential compartmentalization of alternative transcript isoforms.Expression proteomics of UPF1 knockdown in HeLa cells reveals autoregulation of hnRNP A2/B1 mediated by alternative splicing resulting in nonsense-mediated mRNA decay.Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis.Alternative splicing of TAF6: downstream transcriptome impacts and upstream RNA splice control elements.A potential role for initiator-tRNA in pre-mRNA splicing regulation Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay.Comprehensive analysis of alternative splicing in Digitalis purpurea by strand-specific RNA-Seq.Post-transcriptional regulation of 5-lipoxygenase mRNA expression via alternative splicing and nonsense-mediated mRNA decay Regulation of alternative splicing by reversible protein phosphorylation.Efficient in vivo manipulation of alternative pre-mRNA splicing events using antisense morpholinos in mice.Distinct types of disorder in the human proteome: functional implications for alternative splicing.

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Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

http://www.wikidata.org/entity/Q34324095

description

2006 nî lūn-bûn

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2006 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2006 թվականի հունվարին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Quantitative microarray profil ...... cay to control gene expression

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Arneet L Saltzman

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Benjamin J Blencowe

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Brendan J Frey

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Christine Misquitta

http://www.w3.org/2001/XMLSchema#string

Ofer Shai

http://www.w3.org/2001/XMLSchema#string

Qun Pan

http://www.w3.org/2001/XMLSchema#string

Yoon Ki Kim

http://www.w3.org/2001/XMLSchema#string

P2860

An unappreciated role for RNA surveillance

Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon

Role of the nonsense-mediated decay factor hUpf3 in the splicing-dependent exon-exon junction complex

Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay

Y14 and hUpf3b form an NMD-activating complex

The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling.

Nonsense-mediated mRNA decay: from vacuum cleaner to Swiss army knife

The functional landscape of mouse gene expression

Mechanisms of alternative pre-messenger RNA splicing

Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities

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10.1101/GAD.1382806

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2

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20

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Lynne E. Maquat

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2006-01-01T00:00:00Z

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7354921

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16418482

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1356107

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