Issues in bioinformatics benchmarking: the case study of multiple sequence alignment. - Wikidata - awgldk - TriplyDB

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

http://www.wikidata.org/entity/Q34368001

about

DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment Use of ChIP-Seq data for the design of a multiple promoter-alignment method Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega Benchmarking database performance for genomic data.A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.How to evaluate performance of prediction methods? Measures and their interpretation in variation effect analysis.VariBench: a benchmark database for variations.Structural phylogeny by profile extraction and multiple superimposition using electrostatic congruence as a discriminator.Sequence Bundles: a novel method for visualising, discovering and exploring sequence motifs.Benchmarks for flexible and rigid transcription factor-DNA docking.Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix A computational method for identification of vaccine targets from protein regions of conserved human leukocyte antigen binding Benchmarking spliced alignment programs including Spaln2, an extended version of Spaln that incorporates additional species-specific features.Benchmarking the next generation of homology inference tools.An enhanced algorithm for multiple sequence alignment of protein sequences using genetic algorithm.SeqFIRE: a web application for automated extraction of indel regions and conserved blocks from protein multiple sequence alignments.The fractured landscape of RNA-seq alignment: the default in our STARs.

P2860

Q21999498-07C7E2F0-4766-435A-A283-1D6D3A502FE4 Q24597066-97B5A553-017E-4B85-BCA4-9EDC4F53BF2F Q27860809-671B9767-E9E3-49B5-BF5E-6BF540A93444 Q30882823-D9C364C0-8EBC-451F-9CE7-4D4C8BE2B3BA Q33869871-772815CC-523E-4B21-B880-13CE8E452A47 Q34324933-793D882A-6B35-45FF-9F06-9680D8BDE2AE Q34383949-B59F0908-37A9-4D2A-823A-D1D88DE4D2AC Q34418947-CB8FB63B-698D-4E3A-B8E5-1D7E424E4A2A Q35263933-E28F09BA-5CFA-475F-A05E-F16ECC3C8C5E Q35685092-2C94ADE9-FF82-41EF-A5E3-A4152D0A79BC Q35744639-135D02B3-35E0-48FF-BDDC-92CEA82A1F73 Q35872252-959353BB-4739-4D8A-8D2E-8C7C8EE84056 Q36368724-E445AAD0-7158-4A68-B6FD-3F90FCC039B7 Q37237825-A59F2629-4459-4225-B411-18D8D26612BF Q39865959-8E451D6A-D888-400B-BE25-7CE06940AC20 Q41966832-32313AA6-BAB2-494F-8D7A-60BE4783419C Q52838026-E5223C60-1071-4333-8DD9-31511751FCB3

P2860

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

http://www.wikidata.org/entity/Q34368001

description

2010 nî lūn-bûn

@nan

2010 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հուլիսին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

@wuu

name

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@ast

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@en

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@nl

type

label

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@ast

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@en

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@nl

prefLabel

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@ast

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@en

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@nl

P1433

Q34368001-8575C96E-B824-4DCF-B444-09C75654C196

P1476

Q34368001-EDA0119F-0583-49BD-B009-CA20610DBC3D

P2093

Q34368001-10F743E2-BD5B-4228-9023-07654266E889

Q34368001-2A8A2C02-F0F8-4CDB-BEB9-C0B2CA4468FC

Q34368001-8FAA9B68-8FBD-483A-A6A7-D21DDBBFC26B

P275

Q34368001-EC3B025C-1849-4095-B373-A97AC6297FF8

P2860

Q34368001-03C9870F-24C5-4798-997E-B0A775B4283C

Q34368001-0624F7BC-E586-4357-942A-269081668139

Q34368001-19BCDF65-19D0-4FCC-8DD0-A575C91B05D7

Q34368001-1B5398DC-6D2F-4C9A-9BCD-06486650118B

Q34368001-1CB36613-D53B-4D76-AFA0-F32157AFB0B1

Q34368001-24093646-68D7-45F4-95D0-EAEEBCE235E5

Q34368001-2938190E-CD94-4B34-BC5A-9D400F9E71B5

Q34368001-2DB55160-886C-4B34-969F-90891D4AD863

Q34368001-2E3118A2-8E6F-4466-9E43-54F9268A4DA4

Q34368001-3125A59E-C53F-4029-84B6-A74C42B6A211

P304

Q34368001-B13C5435-8244-42AF-91C9-E2CC9B6F6EAC

P31

Q34368001-1AC6E2AD-1057-43A1-8A06-A1D4A23DC8BB

Q34368001-F4A6F62D-8F4B-41FD-AFAF-4818A67E03F8

P356

Q34368001-BACFAA20-5C0E-4B8F-BEEC-ED127AE39CBB

P407

Q34368001-2FAB09F3-6019-42AE-A88E-986D126C768F

P433

Q34368001-64B1818F-873F-4B6E-90CD-B852490BFC46

P478

Q34368001-8517B844-CB4D-4933-850B-D3DA0CD10C91

P577

Q34368001-00E0BC01-AF7A-4D9C-9130-CA5F9A225E82

Q34368001-11301498-3969-4849-BAAA-3BB37D1C02CA

P5875

Q34368001-3AFF9491-3043-48C6-8F44-07C531D14307

P698

Q34368001-BEF98E6C-3871-4DC7-9F5A-A56FA4C4532B

P921

Q34368001-9D929C46-4B0F-4F50-AF63-D7964C84C86E

Q34368001-AB166DC1-42A1-4E18-8114-7173C889530C

P932

Q34368001-C94AACA5-4723-44CB-BA7C-8F339F96EC53

P356

P1433

Nucleic Acids Research

P1476

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

@en

P2093

Julie D Thompson

http://www.w3.org/2001/XMLSchema#string

Mohamed Radhouene Aniba

http://www.w3.org/2001/XMLSchema#string

Olivier Poch

http://www.w3.org/2001/XMLSchema#string

P275

P2860

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

A benchmark of multiple sequence alignment programs upon structural RNAs.

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

SAGA: sequence alignment by genetic algorithm

A comprehensive comparison of multiple sequence alignment programs

ProbCons: Probabilistic consistency-based multiple sequence alignment

Benchmarking tools for the alignment of functional noncoding DNA

MUSCLE: multiple sequence alignment with high accuracy and high throughput

The Pfam protein families database

P304

7353-7363

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/NAR/GKQ625

http://www.w3.org/2001/XMLSchema#string

P407

P433

21

http://www.w3.org/2001/XMLSchema#string

P478

38

http://www.w3.org/2001/XMLSchema#string

P577

2010-07-17T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

2010-11-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

45271907

http://www.w3.org/2001/XMLSchema#string

P698

20639539

http://www.w3.org/2001/XMLSchema#string

P921

biomedical investigative technique

P932

2995051

http://www.w3.org/2001/XMLSchema#string