High-throughput sequencing reveals a simple model of nucleosome energetics. - Wikidata - awgldk - TriplyDB

High-throughput sequencing reveals a simple model of nucleosome energetics.

High-throughput sequencing reveals a simple model of nucleosome energetics.

http://www.wikidata.org/entity/Q34397419

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Linking genome to epigenome Genome-wide nucleosome positioning is orchestrated by genomic regions associated with DNase I hypersensitivity in rice.Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters.Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development.Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast.Nucleosome positioning: resources and tools online.Analysis of biological features associated with meiotic recombination hot and cold spots in Saccharomyces cerevisiae Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.Global remodeling of nucleosome positions in C. elegans.An effect of DNA sequence on nucleosome occupancy and removal.Nucleosome free regions in yeast promoters result from competitive binding of transcription factors that interact with chromatin modifiers.Chromatin remodelers clear nucleosomes from intrinsically unfavorable sites to establish nucleosome-depleted regions at promoters.Statistical Mechanics of Nucleosomes Constrained by Higher-Order Chromatin Structure Functional roles of nucleosome stability and dynamics.Statistical mechanics of nucleosome ordering by chromatin-structure-induced two-body interactions Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner.Micrococcal nuclease does not substantially bias nucleosome mapping.A Biophysical Approach to Predicting Protein-DNA Binding Energetics Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing.Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in Drosophila melanogaster.A deformation energy-based model for predicting nucleosome dyads and occupancy Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures Ubiquitous nucleosome crowding in the yeast genome.Higher-order chromatin structure: bridging physics and biology.Nucleosome positioning in yeasts: methods, maps, and mechanisms.Nucleosome stability dramatically impacts the targeting of somatic hypermutation.Mutation bias, rather than binding preference, underlies the nucleosome-associated G+C% variation in eukaryotes.Genome-Wide Nucleosome Occupancy and Positioning and Their Impact on Gene Expression and Evolution in Plants.Effects of DNA methylation on nucleosome stability Quantifying the role of steric constraints in nucleosome positioning Characteristics of nucleosomes and linker DNA regions on the genome of the basidiomycete Mixia osmundae revealed by mono- and dinucleosome mapping.Molecular dynamics study of the role of the spine of hydration in DNA A-tracts in determining nucleosome occupancy.Sequence determinants of histone-DNA binding preferences: comment on "Cracking the chromatin code: precise rule of nucleosome positioning" by Edward N. Trifonov.Precise genome-wide mapping of single nucleosomes and linkers in vivo.Conditions for positioning of nucleosomes on DNA.Major Determinants of Nucleosome Positioning.A unified computational framework for modeling genome-wide nucleosome landscape

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P2860

High-throughput sequencing reveals a simple model of nucleosome energetics.

http://www.wikidata.org/entity/Q34397419

description

2010 nî lūn-bûn

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2010 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2010 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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name

High-throughput sequencing reveals a simple model of nucleosome energetics.

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High-throughput sequencing reveals a simple model of nucleosome energetics.

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High-throughput sequencing reveals a simple model of nucleosome energetics.

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type

label

High-throughput sequencing reveals a simple model of nucleosome energetics.

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High-throughput sequencing reveals a simple model of nucleosome energetics.

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High-throughput sequencing reveals a simple model of nucleosome energetics.

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prefLabel

High-throughput sequencing reveals a simple model of nucleosome energetics.

@ast

High-throughput sequencing reveals a simple model of nucleosome energetics.

@en

High-throughput sequencing reveals a simple model of nucleosome energetics.

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Proceedings of the National Academy of Sciences of the United States of America

P1476

High-throughput sequencing reveals a simple model of nucleosome energetics.

@en

P2093

Denis Tolkunov

http://www.w3.org/2001/XMLSchema#string

George Locke

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Kevin Struhl

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Zarmik Moqtaderi

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P2860

Translating the Histone Code

A genomic code for nucleosome positioning

A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

ATP-dependent nucleosome remodeling

Genomic sequence is highly predictive of local nucleosome depletion.

Preferentially quantized linker DNA lengths in Saccharomyces cerevisiae.

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

G+C content dominates intrinsic nucleosome occupancy

Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo.

The structure of DNA in the nucleosome core.

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