Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network. - Wikidata - awgldk - TriplyDB

Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network.

Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network.

http://www.wikidata.org/entity/Q34947143

about

NONCODE v3.0: integrative annotation of long noncoding RNAs Bioinformatics tools and novel challenges in long non-coding RNAs (lncRNAs) functional analysis Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs Long non-coding RNAs and complex human diseases Introduction to sequencing the brain transcriptome Advances in long noncoding RNAs: identification, structure prediction and function annotation Computational approaches towards understanding human long non-coding RNA biology Analysis of the miRNA-mRNA-lncRNA networks in ER+ and ER- breast cancer cell lines NONCODEv4: exploring the world of long non-coding RNA genes Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize.Genome-wide identification, characterization and evolutionary analysis of long intergenic noncoding RNAs in cucumber.Identification and function annotation of long intervening noncoding RNAs.Identification and characterization of long non-coding RNAs related to mouse embryonic brain development from available transcriptomic data.Genome-wide identification and functional annotation of Plasmodium falciparum long noncoding RNAs from RNA-seq data.OrthoClust: an orthology-based network framework for clustering data across multiple species.Analysis of discordant Affymetrix probesets casts serious doubt on idea of microarray data reutilization.Computational identification of epigenetically regulated lncRNAs and their associated genes based on integrating genomic data.LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data NONCODE 2016: an informative and valuable data source of long non-coding RNAs.Long noncoding RNA expression profile analysis of colorectal cancer and metastatic lymph node based on microarray data Characterizing and annotating the genome using RNA-seq data.Improved method for prioritization of disease associated lncRNAs based on ceRNA theory and functional genomics data.LncRNAs2Pathways: Identifying the pathways influenced by a set of lncRNAs of interest based on a global network propagation method.Long noncoding RNA expression signature to predict platinum-based chemotherapeutic sensitivity of ovarian cancer patients.Identification of differentially expressed lncRNAs involved in transient regeneration of the neonatal C57BL/6J mouse heart by next-generation high-throughput RNA sequencing.Selecting biologically informative genes in co-expression networks with a centrality score.Expression profiles and initial confirmation of long noncoding RNAs in Chinese patients with pulmonary adenocarcinoma A novel reannotation strategy for dissecting DNA methylation patterns of human long intergenic non-coding RNAs in cancers.Deep sequencing of HIV-infected cells: insights into nascent transcription and host-directed therapy.The role of long non-coding RNAs in neurodevelopment, brain function and neurological disease Raalin, a transcript enriched in the honey bee brain, is a remnant of genomic rearrangement in Hymenoptera.LncRBase: an enriched resource for lncRNA information.Long noncoding RNAs expression patterns associated with chemo response to cisplatin based chemotherapy in lung squamous cell carcinoma patients.Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications Databases for lncRNAs: a comparative evaluation of emerging tools Computational prediction of polycomb-associated long non-coding RNAs.Genome-wide DNA methylome analysis reveals epigenetically dysregulated non-coding RNAs in human breast cancer.Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function.

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Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network.

http://www.wikidata.org/entity/Q34947143

description

2011 nî lūn-bûn

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2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2011 թվականի հունվարին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Large-scale prediction of long ...... ng gene co-expression network.

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Large-scale prediction of long ...... ng gene co-expression network.

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Large-scale prediction of long ...... ng gene co-expression network.

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Large-scale prediction of long ...... ng gene co-expression network.

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Nucleic Acids Research

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Large-scale prediction of long ...... ng gene co-expression network.

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P2093

Changning Liu

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Dechao Bu

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Geir Skogerbø

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Guoguang Zhao

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Haitao Luo

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Haitao Zhao

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Hui Xiao

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Qi Liao

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Ruoyu Miao

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Shuli Kang

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P2860

Most "dark matter" transcripts are associated with known genes

WGCNA: an R package for weighted correlation network analysis

Complete sequencing and characterization of 21,243 full-length human cDNAs

The netrin-G1 ligand NGL-1 promotes the outgrowth of thalamocortical axons

Activation of p53 by MEG3 non-coding RNA

Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation

Cluster analysis and display of genome-wide expression patterns

Specific expression of long noncoding RNAs in the mouse brain

Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation

Network-based prediction of protein function

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3864-3878

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10.1093/NAR/GKQ1348

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9

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39

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49767726

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21247874

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3089475

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