Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae - Wikidata - awgldk - TriplyDB

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

http://www.wikidata.org/entity/Q35145508

about

Nonsense-mediated mRNA decay: novel mechanistic insights and biological impact PfSR1 controls alternative splicing and steady-state RNA levels in Plasmodium falciparum through preferential recognition of specific RNA motifs Alternative Splicing in Next Generation Sequencing Data of Saccharomyces cerevisiae.Workflow for Genome-Wide Determination of Pre-mRNA Splicing Efficiency from Yeast RNA-seq Data.High-resolution profiling of NMD targets in yeast reveals translational fidelity as a basis for substrate selection.Stress-induced nuclear RNA degradation pathways regulate yeast bromodomain factor 2 to promote cell survival.Coupling and coordination in gene expression processes with pre-mRNA splicing.Immunity of the Saccharomyces cerevisiae SSY5 mRNA to nonsense-mediated mRNA decay.Quality control of transcription start site selection by nonsense-mediated-mRNA decay Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast Nonsense-mediated RNA decay--a switch and dial for regulating gene expression Sequencing of lariat termini in S. cerevisiae reveals 5' splice sites, branch points, and novel splicing events Splicing-Mediated Autoregulation Modulates Rpl22p Expression in Saccharomyces cerevisiae.Stochastic alternative splicing is prevalent in mungbean (Vigna radiata).Regulation of alternative splicing in Drosophila by 56 RNA binding proteins.Nonsense-mediated mRNA decay in Tetrahymena is EJC independent and requires a protozoa-specific nuclease Widespread alternative and aberrant splicing revealed by lariat sequencing Intron retention-dependent gene regulation in Cryptococcus neoformans Posttranscriptional Regulation of Gcr1 Expression and Activity Is Crucial for Metabolic Adjustment in Response to Glucose Availability.The power of fission: yeast as a tool for understanding complex splicing.Response of Gene Expression and Alternative Splicing to Distinct Growth Environments in Tomato.Regulation of natural mRNAs by the nonsense-mediated mRNA decay pathway.NMD monitors translational fidelity 24/7.The histone variant H2A.Z promotes efficient cotranscriptional splicing in S. cerevisiae.Stress and the nonsense-mediated RNA decay pathway.The low information content of Neurospora splicing signals: implications for RNA splicing and intron origin.Cwc21p promotes the second step conformation of the spliceosome and modulates 3' splice site selection.Identification of new branch points and unconventional introns in Saccharomyces cerevisiae.ARSDA: A New Approach for Storing, Transmitting and Analyzing Transcriptomic Data.Functions for fission yeast splicing factors SpSlu7 and SpPrp18 in alternative splice-site choice and stress-specific regulated splicing.Introns provide a platform for intergenic regulatory feedback of RPL22 paralogs in yeast.Transcription rate strongly affects splicing fidelity and cotranscriptionality in budding yeast.Transcriptome-wide identification of the RNA-binding landscape of the chromatin-associated protein PARP1 reveals functions in RNA biogenesis.Nineteen complex-related factor Prp45 is required for the early stages of cotranscriptional spliceosome assembly.A Genetic Screen Identifies PRP18a, a Putative Second Step Splicing Factor Important for Alternative Splicing and a Normal Phenotype in Arabidopsis thaliana.Alternative Splicing in the Hippo Pathway-Implications for Disease and Potential Therapeutic Targets.Comparative Study on Alternative Splicing in Human Fungal Pathogens Suggests Its Involvement During Host Invasion

P2860

Q26750271-5ADB692F-90C5-4D67-B0CA-38850353BBE1 Q30048292-56E5499E-E625-4967-8952-691CF732CB12 Q31005770-54FCB751-4053-4995-8078-C4BCC62659BE Q31152577-3F3DF7F2-F4CD-428B-9DA4-32488EE5810B Q33569251-544D9FC0-8968-4577-83F6-83A7BD16DB22 Q35261061-37EC6BB2-A62F-4820-904B-60D93BB20F13 Q35381296-B7E53954-CF17-4C4C-97FF-08DC6B4F0184 Q35596634-A27E006B-78F3-4A1F-88F2-505ECB68C890 Q35614744-85A214D1-F47A-490C-8A7C-9E58795704BE Q35664130-C788DF3A-E78C-4746-A62E-9DE6120657C2 Q35679722-07D848E0-91F2-4CE2-96A5-F5853CA49383 Q35863719-41DBAFFC-EE0D-4C8B-8088-00AEC63E46FA Q35994862-0ECD69F4-4D3B-4AC8-9682-7BE6332F4904 Q36072723-B06B3D45-BB20-41F3-B8BB-6D532B1B6FF6 Q36199609-BFBB6AAB-B70A-41C9-974D-21B239618E6D Q36344535-32D5AA8F-19C2-4FD5-A309-E27BF409FC9F Q36676702-FA3B3FFB-372D-4E7E-B69D-4BE8B44F21D2 Q37220077-50D7B765-300E-4A44-8AF3-309EED3287D2 Q37426920-4FE4E2D5-6C88-4C90-A01A-0B672A606DD9 Q37699482-DE6EACE1-8466-4CB4-8CE4-7C2FBCF1B3F7 Q37728976-F4489DEF-3FE6-4262-8394-071578504885 Q38231157-2AECC8A3-6000-4350-B293-1EA71665FE8F Q38768084-E5B20E29-542E-4F05-93F7-E762E10BE724 Q38818037-8169D833-4DCD-44E3-86F2-E18785045BE9 Q39306218-9F1719E9-B80D-42E3-80B4-58BD29BD3EE4 Q39933660-09CD32DB-A076-4998-A6E1-748BFE7D984A Q41293984-CEC23E79-1FB7-499C-8ED0-1A775AC3C0F7 Q41657185-7BEDF98A-6DBA-4BFC-BE9A-019C31783579 Q46272966-B32626EA-DF34-455B-A0A5-6466ABEAEAC0 Q47140298-59634D83-521E-4ED5-BF91-2C37666BCCF0 Q47205612-DCDEB211-8E0D-4A82-9750-68875A4CD2C6 Q47279388-C46B9242-E2C4-41EF-9230-8C8036AD5E66 Q47827497-BEA8E249-170B-4875-8301-A417F15EC0DA Q48136548-0ABEFF2C-C9DA-40CB-AAFC-66EF0CFA418D Q52371994-EE8C100D-384D-4FED-8F75-9C5029372B5C Q52658016-F8412829-5CA7-4E71-A163-67C3CABE7827 Q58586609-2318F312-3366-4D59-A7FC-CD9BEC091DE2

P2860

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

http://www.wikidata.org/entity/Q35145508

description

2014 nî lūn-bûn

@nan

2014 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2014年の論文

@ja

2014年論文

@yue

2014年論文

@zh-hant

2014年論文

@zh-hk

2014年論文

@zh-mo

2014年論文

@zh-tw

2014年论文

@wuu

name

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@ast

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@en

type

label

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@ast

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@en

prefLabel

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@ast

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@en

P1433

Q35145508-59568AC1-54D7-41A1-9331-3CAA59B90C2B

P1476

Q35145508-374F3F78-E0A7-4121-9BA9-0DA6DB513BF5

P2093

Q35145508-189C388F-32AA-48CB-9486-BD24B336AAA6

Q35145508-4FFB75B0-0326-4A65-BF04-1044135265A1

Q35145508-54C6C742-451B-45B2-B8B3-8683D8F0E3BF

Q35145508-F55257A8-B090-4804-AC18-9937D84E87A9

P2860

Q35145508-02D69F56-F190-4848-AA70-322289E4D600

Q35145508-03205AC3-DE5A-4305-9585-903E33FCD39A

Q35145508-0900E4B5-D73A-46CA-AC80-F971C3262439

Q35145508-0D7442FA-4DE1-43EB-8308-F22871C15DC4

Q35145508-0DAA034C-2658-4B48-92B5-2BDDC29FB17F

Q35145508-145DBD3B-1B20-4D4D-B715-44A405CE0D10

Q35145508-1653773C-39AB-4176-87E8-3D95DD16A32A

Q35145508-24EC3FCD-AF4B-41EF-B304-8A6FCC61FE84

Q35145508-3231E1D1-9E3D-4D7C-BFE6-0F676F71D41A

Q35145508-3BB144C7-B8C6-4455-A539-AF14B64D7D2A

P304

Q35145508-4DC743C1-80BB-429F-A25B-E39F7172959C

P31

Q35145508-1296134E-30AE-4805-81B8-E5C86E75A516

P356

Q35145508-0ACD97B8-AD6A-40C0-BD6B-DD8D06C1E6A8

P433

Q35145508-E317C2F8-3837-4ECD-9CC9-A47953D01534

P478

Q35145508-23E28EFD-F57A-41D8-9D95-34F62FD492E2

P50

Q35145508-581DF433-E452-45A1-949A-A67549D8E5FC

P577

Q35145508-CEE0BBD7-38A3-4F31-845E-FF89D65607AF

P5875

Q35145508-187DC84F-FE2B-4758-BA2B-C4FF23EBDF45

P698

Q35145508-B67D9CF6-CF26-4C26-909A-E96009B708A8

P921

Q35145508-64232698-7B15-4952-ABDD-651366719CEE

Q35145508-D49C2266-9F0E-443C-9A1B-2FF7B79D80F3

P932

Q35145508-A84EF347-4729-4797-8A2D-3771BDAD6D5C

P356

JOURNAL.PGEN.1004249

P1433

P1476

Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae

@en

P2093

Guillaume F Chanfreau

http://www.w3.org/2001/XMLSchema#string

Jason Gabunilas

http://www.w3.org/2001/XMLSchema#string

Stephen Douglass

http://www.w3.org/2001/XMLSchema#string

Tadashi Kawashima

http://www.w3.org/2001/XMLSchema#string

P2860

Prp16p, Slu7p, and Prp8p interact with the 3' splice site in two distinct stages during the second catalytic step of pre-mRNA splicing

BLAT--the BLAST-like alignment tool

Alternative splicing and subfunctionalization generates functional diversity in fungal proteomes

Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing

Genomic expression programs in the response of yeast cells to environmental changes

Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry

How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing.

A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins.

Ynl038wp (Gpi15p) is the Saccharomyces cerevisiae homologue of human Pig-Hp and participates in the first step in glycosylphosphatidylinositol assembly.

SRC1: an intron-containing yeast gene involved in sister chromatid segregation.

P304

e1004249

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1371/JOURNAL.PGEN.1004249

http://www.w3.org/2001/XMLSchema#string

P433

4

http://www.w3.org/2001/XMLSchema#string

P478

10

http://www.w3.org/2001/XMLSchema#string

P50

Matteo Pellegrini

P577

2014-04-10T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

261604174

http://www.w3.org/2001/XMLSchema#string

P698

24722551

http://www.w3.org/2001/XMLSchema#string

P921

Saccharomyces cerevisiae

P932

3983031

http://www.w3.org/2001/XMLSchema#string