Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
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Real-time structural transitions are coupled to chemical steps in ATP hydrolysis by Eg5 kinesinMolecular dynamics simulations reveal proton transfer pathways in cytochrome C-dependent nitric oxide reductaseDeprotonation of D96 in Bacteriorhodopsin Opens the Proton Uptake PathwayMolecular mechanisms for generating transmembrane proton gradientsVisualizing water molecules in transmembrane proteins using radiolytic labeling methods.A delocalized proton-binding site within a membrane proteinA microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin-like properties.Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates.Detection of an intermediary, protonated water cluster in photosynthetic oxygen evolution.Proton transfer via a transient linear water-molecule chain in a membrane protein.Proton storage site in bacteriorhodopsin: new insights from quantum mechanics/molecular mechanics simulations of microscopic pK(a) and infrared spectraConformational changes in the archaerhodopsin-3 proton pump: detection of conserved strongly hydrogen bonded water networksDynamical magnetostructural properties of Anabaena ferredoxin.Amino acids with an intermolecular proton bond as proton storage site in bacteriorhodopsin.Acid-base analysis: a critique of the Stewart and bicarbonate-centered approaches.Active water in protein-protein communication within the membrane: the case of SRII-HtrII signal relay.Long-distance proton transfer with a break in the bacteriorhodopsin active site.Theoretical spectroscopy using molecular dynamics: theory and application to CH5(+) and its isotopologues.Structural changes due to the deprotonation of the proton release group in the M-photointermediate of bacteriorhodopsin as revealed by time-resolved FTIR spectroscopy.Collective proton transfer in ordinary ice: local environments, temperature dependence and deuteration effects.The energetics of the primary proton transfer in bacteriorhodopsin revisited: it is a sequential light-induced charge separation after allThe structure and IR signatures of the arginine-glutamate salt bridge. Insights from the classical MD simulations.Full-Quantum chemical calculation of the absorption maximum of bacteriorhodopsin: a comprehensive analysis of the amino acid residues contributing to the opsin shift.H(aq)+ structures in proton wires inside nanotubes.Glycine in aqueous solution: solvation shells, interfacial water, and vibrational spectroscopy from ab initio molecular dynamics.Terahertz absorption spectroscopy of a liquid using a polarity probe: a case study of trehalose/water mixtures.Potential proton-release channels in bacteriorhodopsin.Nanoconfinement effects on hydrated excess protons in layered materials.A theoretical analysis of the potential role of π-π stacking interactions in the photoprotolytic cycle of firefly luciferin.pH-sensitive vibrational probe reveals a cytoplasmic protonated cluster in bacteriorhodopsin.Orientation of non-spherical protonated water clusters revealed by infrared absorption dichroism.A quantum description of the proton movement in an idealized NHN+ bridge.Semiquantum molecular dynamics simulation of liquid water by time-dependent Hartree approach.Full dimensional (15 dimensional) quantum-dynamical simulation of the protonated water-dimer IV: isotope effects in the infrared spectra of D(D2O)2(+), H(D2O)2(+), and D(H2O)2(+) isotopologues.Gas-phase infrared spectroscopy and multidimensional quantum calculations of the protonated ammonia dimer N2H7+.Excited-state proton-relay dynamics of 7-hydroxyquinoline controlled by solvent reorganization in room temperature ionic liquids.Ground-state proton-transfer dynamics governed by configurational optimization.Quantum simulation of collective proton tunneling in hexagonal ice crystals.The vibrational spectra of protonated water clusters: A benchmark for self-consistent-charge density-functional tight bindingHow Does a Membrane Protein Achieve a Vectorial Proton Transfer Via Water Molecules?
P2860
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P2860
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@ast
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@en
type
label
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@ast
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@en
prefLabel
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@ast
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@en
P2860
P356
P1476
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
@en
P2093
Dominik Marx
Gerald Mathias
P2860
P304
P356
10.1073/PNAS.0609229104
P407
P577
2007-04-16T00:00:00Z