A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing. - Wikidata - awgldk - TriplyDB

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

http://www.wikidata.org/entity/Q35945401

about

A global view of cancer-specific transcript variants by subtractive transcriptome-wide analysis Neuronal Elav-like (Hu) proteins regulate RNA splicing and abundance to control glutamate levels and neuronal excitability.Global regulation of alternative splicing during myogenic differentiation RBFOX and SUP-12 sandwich a G base to cooperatively regulate tissue-specific splicing A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions RNA processing and its regulation: global insights into biological networks ARH-seq: identification of differential splicing in RNA-seq data Comparative analysis of mRNA isoform expression in cardiac hypertrophy and development reveals multiple post-transcriptional regulatory modules.Computational Identification of Tissue-Specific Splicing Regulatory Elements in Human Genes from RNA-Seq Data FIRMA: a method for detection of alternative splicing from exon array data Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.Identifying differential exon splicing using linear models and correlation coefficients.A primer on regression methods for decoding cis-regulatory logic.Genome-wide prediction of cis-acting RNA elements regulating tissue-specific pre-mRNA alternative splicing Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis.Model-based detection of alternative splicing signals.Exon-level microarray analyses identify alternative splicing programs in breast cancer.Identification of conserved splicing motifs in mutually exclusive exons of 15 insect species A biophysical model for identifying splicing regulatory elements and their interactions.Efficient in vivo manipulation of alternative pre-mRNA splicing events using antisense morpholinos in mice.Fox-1 family of RNA-binding proteins.The RNA-binding protein Rbfox1 regulates splicing required for skeletal muscle structure and function.Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines Neural differentiation modulates the vertebrate brain specific splicing program Identification of Targets of CUG-BP, Elav-Like Family Member 1 (CELF1) Regulation in Embryonic Heart Muscle.VERSE: a varying effect regression for splicing elements discovery STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.Alternative pre-mRNA splicing switches modulate gene expression in late erythropoiesis.A computational approach for genome-wide mapping of splicing factor binding sites.RNA binding proteins in the regulation of heart development.Pressure-overload cardiac hypertrophy is associated with distinct alternative splicing due to altered expression of splicing factors.Conserved elements associated with ribosomal genes and their trans-splice acceptor sites in Caenorhabditis elegans.Developmental regulation of RNA processing by Rbfox proteins.Context-dependent splicing regulation: exon definition, co-occurring motif pairs and tissue specificity Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments.Cancer-associated regulation of alternative splicing.Splicing by cell type.Intronic motif pairs cooperate across exons to promote pre-mRNA splicing.

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A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

http://www.wikidata.org/entity/Q35945401

description

2007 nî lūn-bûn

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2007年の論文

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2007年論文

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2007年論文

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2007年论文

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2007年论文

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2007年论文

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name

A correlation with exon expres ...... specific alternative splicing.

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A correlation with exon expres ...... specific alternative splicing.

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A correlation with exon expres ...... specific alternative splicing.

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A correlation with exon expres ...... specific alternative splicing.

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A correlation with exon expres ...... specific alternative splicing.

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A correlation with exon expres ...... specific alternative splicing.

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Alexander Poliakov

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Anthony Schweitzer

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Debopriya Das

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Henry Marr

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Inna Dubchak

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John E Blume

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John G Conboy

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Josh Arribere

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Miki Yamamoto

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Simon Minovitsky

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P2860

Initial sequencing and analysis of the human genome

Discovery of tissue-specific exons using comprehensive human exon microarrays

The Sequence of the Human Genome

The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing

Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing.

Homologues of the Caenorhabditis elegans Fox-1 protein are neuronal splicing regulators in mammals

Sequence information for the splicing of human pre-mRNA identified by support vector machine classification

Role for Fox-1/Fox-2 in mediating the neuronal pathway of calcitonin/calcitonin gene-related peptide alternative RNA processing

MATCH: A tool for searching transcription factor binding sites in DNA sequences

Statistical significance for genomewide studies

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4845-4857

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10.1093/NAR/GKM485

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14

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35

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6212226

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17626050

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1950531

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