Promoter opening via a DNA fork junction binding activity
about
Structural basis of transcription initiationThe RNA polymerase "switch region" is a target for inhibitorsStructural Basis for Promoter −10 Element Recognition by the Bacterial RNA Polymerase σ SubunitStructure and function of CarD, an essential mycobacterial transcription factorCrystal structures of the E. coli transcription initiation complexes with a complete bubbleThe bacterial enhancer-dependent RNA polymerasePromoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization.Regulation of sigma 54-dependent transcription by core promoter sequences: role of -12 region nucleotides.The functional and regulatory roles of sigma factors in transcription.A prehydrolysis state of an AAA+ ATPase supports transcription activation of an enhancer-dependent RNA polymeraseFunction of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerizationReal-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoterThe bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factorMutant forms of Salmonella typhimurium sigma54 defective in transcription initiation but not promoter binding activityThe amino terminus of Salmonella enterica serovar Typhimurium sigma(54) is required for interactions with an enhancer-binding protein and binding to fork junction DNARNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitroTranscription initiation-defective forms of sigma(54) that differ in ability To function with a heteroduplex DNA template.Function-based selection and characterization of base-pair polymorphisms in a promoter of Escherichia coli RNA polymerase-sigma(70)Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex.Identification and characterization of the cognate anti-sigma factor and specific promoter elements of a T. tengcongensis ECF sigma factorDependence of the E. coli promoter strength and physical parameters upon the nucleotide sequence.Interaction of Escherichia coli RNA polymerase σ70 subunit with promoter elements in the context of free σ70, RNA polymerase holoenzyme, and the β'-σ70 complex.Fluorescence resonance energy transfer analysis of escherichia coli RNA polymerase and polymerase-DNA complexes.Coupling of downstream RNA polymerase-promoter interactions with formation of catalytically competent transcription initiation complex.Organization of an activator-bound RNA polymerase holoenzymeA critical role of downstream RNA polymerase-promoter interactions in the formation of initiation complex.Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groovePromoter opening by sigma(54) and sigma(70) RNA polymerases: sigma factor-directed alterations in the mechanism and tightness of controlStructural, functional, and genetic analyses of the actinobacterial transcription factor RbpABase flipping in open complex formation at bacterial promotersRNA polymerase molecular beacon as tool for studies of RNA polymerase-promoter interactions.Mechanism of bacterial transcription initiation: RNA polymerase - promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesisTRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategiesRNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes.Transcription initiation by mix and match elements: flexibility for polymerase binding to bacterial promotersCooperativity and interaction energy threshold effects in recognition of the -10 promoter element by bacterial RNA polymeraseInsights into the mechanism of initial transcription in Escherichia coli RNA polymerase.Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition.The role of bacterial enhancer binding proteins as specialized activators of σ54-dependent transcriptionEscherichia coli RNA polymerase contacts outside the -10 promoter element are not essential for promoter melting.
P2860
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P2860
Promoter opening via a DNA fork junction binding activity
description
1998 nî lūn-bûn
@nan
1998年の論文
@ja
1998年学术文章
@wuu
1998年学术文章
@zh-cn
1998年学术文章
@zh-hans
1998年学术文章
@zh-my
1998年学术文章
@zh-sg
1998年學術文章
@yue
1998年學術文章
@zh
1998年學術文章
@zh-hant
name
Promoter opening via a DNA fork junction binding activity
@ast
Promoter opening via a DNA fork junction binding activity
@en
type
label
Promoter opening via a DNA fork junction binding activity
@ast
Promoter opening via a DNA fork junction binding activity
@en
prefLabel
Promoter opening via a DNA fork junction binding activity
@ast
Promoter opening via a DNA fork junction binding activity
@en
P2860
P356
P1476
Promoter opening via a DNA fork junction binding activity
@en
P2860
P304
11655-11660
P356
10.1073/PNAS.95.20.11655
P407
P577
1998-09-01T00:00:00Z