Promoter opening via a DNA fork junction binding activity - Wikidata - awgldk - TriplyDB

Promoter opening via a DNA fork junction binding activity

Promoter opening via a DNA fork junction binding activity

http://www.wikidata.org/entity/Q36316824

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Structural basis of transcription initiation The RNA polymerase "switch region" is a target for inhibitors Structural Basis for Promoter −10 Element Recognition by the Bacterial RNA Polymerase σ Subunit Structure and function of CarD, an essential mycobacterial transcription factor Crystal structures of the E. coli transcription initiation complexes with a complete bubble The bacterial enhancer-dependent RNA polymerase Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization.Regulation of sigma 54-dependent transcription by core promoter sequences: role of -12 region nucleotides.The functional and regulatory roles of sigma factors in transcription.A prehydrolysis state of an AAA+ ATPase supports transcription activation of an enhancer-dependent RNA polymerase Function of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerization Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor Mutant forms of Salmonella typhimurium sigma54 defective in transcription initiation but not promoter binding activity The amino terminus of Salmonella enterica serovar Typhimurium sigma(54) is required for interactions with an enhancer-binding protein and binding to fork junction DNA RNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitro Transcription initiation-defective forms of sigma(54) that differ in ability To function with a heteroduplex DNA template.Function-based selection and characterization of base-pair polymorphisms in a promoter of Escherichia coli RNA polymerase-sigma(70)Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex.Identification and characterization of the cognate anti-sigma factor and specific promoter elements of a T. tengcongensis ECF sigma factor Dependence of the E. coli promoter strength and physical parameters upon the nucleotide sequence.Interaction of Escherichia coli RNA polymerase σ70 subunit with promoter elements in the context of free σ70, RNA polymerase holoenzyme, and the β'-σ70 complex.Fluorescence resonance energy transfer analysis of escherichia coli RNA polymerase and polymerase-DNA complexes.Coupling of downstream RNA polymerase-promoter interactions with formation of catalytically competent transcription initiation complex.Organization of an activator-bound RNA polymerase holoenzyme A critical role of downstream RNA polymerase-promoter interactions in the formation of initiation complex.Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove Promoter opening by sigma(54) and sigma(70) RNA polymerases: sigma factor-directed alterations in the mechanism and tightness of control Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA Base flipping in open complex formation at bacterial promoters RNA polymerase molecular beacon as tool for studies of RNA polymerase-promoter interactions.Mechanism of bacterial transcription initiation: RNA polymerase - promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis TRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategies RNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes.Transcription initiation by mix and match elements: flexibility for polymerase binding to bacterial promoters Cooperativity and interaction energy threshold effects in recognition of the -10 promoter element by bacterial RNA polymerase Insights into the mechanism of initial transcription in Escherichia coli RNA polymerase.Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition.The role of bacterial enhancer binding proteins as specialized activators of σ54-dependent transcription Escherichia coli RNA polymerase contacts outside the -10 promoter element are not essential for promoter melting.

P2860

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P2860

Promoter opening via a DNA fork junction binding activity

http://www.wikidata.org/entity/Q36316824

description

1998 nî lūn-bûn

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1998年学术文章

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1998年学术文章

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1998年學術文章

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1998年學術文章

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1998年學術文章

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name

Promoter opening via a DNA fork junction binding activity

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Promoter opening via a DNA fork junction binding activity

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Promoter opening via a DNA fork junction binding activity

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Promoter opening via a DNA fork junction binding activity

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Promoter opening via a DNA fork junction binding activity

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Promoter opening via a DNA fork junction binding activity

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Proceedings of the National Academy of Sciences of the United States of America

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Promoter opening via a DNA fork junction binding activity

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Gralla JD

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Guo Y

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P2860

Open complex formation by Escherichia coli RNA polymerase: the mechanism of polymerase-induced strand separation of double helical DNA

Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction

Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase

Polymerase II promoter activation: closed complex formation and ATP-driven start site opening

Transcriptional control--lessons from an E. coli promoter data base.

A mutant RNA polymerase that forms unusual open promoter complexes.

Specific binding of the transcription factor sigma-54 to promoter DNA.

Structural motifs and potential sigma homologies in the large subunit of human general transcription factor TFIIE.

Conserved sequence motifs in the small subunit of human general transcription factor TFIIE.

Effects of amino acid substitutions in the -10 binding region of sigma E from Bacillus subtilis.

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11655-11660

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scholarly article

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