Complexity of chromatin folding is captured by the strings and binders switch model. - Wikidata - awgldk - TriplyDB

Complexity of chromatin folding is captured by the strings and binders switch model.

Complexity of chromatin folding is captured by the strings and binders switch model.

http://www.wikidata.org/entity/Q36342953

about

A simple biophysical model emulates budding yeast chromosome condensation Fractal dimension of chromatin: potential molecular diagnostic applications for cancer prognosis High resolution imaging reveals heterogeneity in chromatin states between cells that is not inherited through cell division.Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains.Simulated binding of transcription factors to active and inactive regions folds human chromosomes into loops, rosettes and topological domains.Chromatin topology is coupled to Polycomb group protein subnuclear organization.Predicting the three-dimensional folding of cis-regulatory regions in mammalian genomes using bioinformatic data and polymer models Protein/DNA interactions in complex DNA topologies: expect the unexpected The role of loops on the order of eukaryotes and prokaryotes On the demultiplexing of chromosome capture conformation data Physical mechanisms behind the large scale features of chromatin organization Inferential Structure Determination of Chromosomes from Single-Cell Hi-C Data Understanding spatial organizations of chromosomes via statistical analysis of Hi-C data Nonspecific bridging-induced attraction drives clustering of DNA-binding proteins and genome organization.High-quality genome (re)assembly using chromosomal contact data.Transposable Elements and DNA Methylation Create in Embryonic Stem Cells Human-Specific Regulatory Sequences Associated with Distal Enhancers and Noncoding RNAs The sequencing bias relaxed characteristics of Hi-C derived data and implications for chromatin 3D modeling Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization.The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes.Hierarchical block matrices as efficient representations of chromosome topologies and their application for 3C data integration.Transient chromatin properties revealed by polymer models and stochastic simulations constructed from Chromosomal Capture data.Global genetic response in a cancer cell: self-organized coherent expression dynamics.Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genome Spatial confinement is a major determinant of the folding landscape of human chromosomes.Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains.Depletion of the chromatin looping proteins CTCF and cohesin causes chromatin compaction: insight into chromatin folding by polymer modelling Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.Three-dimensional genome architecture: players and mechanisms.The 4D nucleome: Evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments.Estrogen induces global reorganization of chromatin structure in human breast cancer cells Single-cell states in the estrogen response of breast cancer cell lines Clustering of mammalian Hox genes with other H3K27me3 targets within an active nuclear domain.Topology, structures, and energy landscapes of human chromosomes.Emergent Self-Organized Criticality in Gene Expression Dynamics: Temporal Development of Global Phase Transition Revealed in a Cancer Cell Line.Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains The chromatin fiber: multiscale problems and approaches.Large Scale Chromosome Folding Is Stable against Local Changes in Chromatin Structure.Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells.A Looping-Based Model for Quenching Repression.Perspectives: using polymer modeling to understand the formation and function of nuclear compartments.

P2860

Q21128628-47B97B45-AA5F-4599-8D03-5AF3576277E9 Q27025883-166C3F35-E06B-495D-936F-3CB1202F09F0 Q27318586-D78A50F9-B334-474B-BF5D-359E63FD25C0 Q27321750-032929A7-C626-4ED9-93A2-BE90BDCAFDF2 Q27324074-129D82D0-755E-40E5-A1D4-106D3FE7CC35 Q27335771-9D680769-45FF-426A-8514-5848D5B1D6EA Q27336278-62438636-467E-49F6-9040-D97003029538 Q28073043-5ACD6A43-7202-445F-BB08-CC2B66A975CA Q28081349-0EC48060-B88E-4D2B-A686-107F4E7E12CA Q28082824-5D666985-6E85-4589-9157-3FD022155598 Q28086968-2D5FB181-8627-443A-9E4C-7209744D0F20 Q28564076-849A5832-1C53-4561-B01B-FCE45B5660DE Q28647858-8CFCAFA1-CD8A-41A8-A5E0-47CF0CE69E8E Q30546230-0309E573-BF70-46F6-86F5-D24C90CE4AC5 Q30612938-569CBA4D-6412-42C5-9A8A-4F22836D6B5B Q30656963-7C835EE0-8F32-4A80-AB19-24B1E62FDFB3 Q30662716-3ABCFFEF-9011-440C-A2D4-66972B29F3F1 Q30826585-37CAB9C7-B0A0-469C-ADF0-8A1A5B4AD4DB Q30833339-E1E244B2-2FE7-43FE-8406-4A270A46A444 Q31032946-B9FD3111-C2F1-434B-B7D8-31FEAFE6376E Q33570971-82047A04-CA3C-48FA-872F-6F78AE34A9C9 Q33618351-EF899D3C-E692-480A-B68D-D9EB6C66FD10 Q33740855-28AA84AD-41E2-4D40-9B94-C340FCEC7166 Q33983460-379FA10C-FEB3-44C7-BA8C-9697B0ED3593 Q34115510-56A69D6E-F57C-4425-B62A-6293A7563CD0 Q34314868-0D0A0ABC-7EDF-40D3-871E-9C217262468A Q34343663-CA8520B5-9403-4543-8E82-1974C9EECAD5 Q34466522-B1D13C47-9336-4AAF-86F4-0426CA2A4012 Q34478652-45E68809-AF12-4F61-A76A-344E2EAB0C57 Q34627952-FBE8C577-21CD-4E0A-B3B9-99B4988D5069 Q35106103-DA6277A9-9587-436B-BDE6-76538C3155B9 Q35485617-30E17B42-B74B-4764-9E95-FFBCA2ADE65A Q35616170-90084725-7C70-4AD1-A5D9-9CE0D0FC64F7 Q35661742-B8834FDB-9067-4168-B96F-30B78647E8C6 Q35745428-19D8882F-6108-4637-B3AC-ADC1513B9F36 Q35768249-779E4EAC-98A0-428E-A03D-836ACD1BAFEA Q36050570-9FF5DFBF-6EB8-440E-9CEA-736A7A0CB709 Q36168968-21D0BE79-A6A8-47EA-8356-33DAE36C4883 Q36248746-E15CCE41-1EED-4015-95DD-0F102C8BA066 Q36250466-81146EEE-8CBD-4D59-BDA6-2308DFAC1CD3

P2860

Complexity of chromatin folding is captured by the strings and binders switch model.

http://www.wikidata.org/entity/Q36342953

description

2012 nî lūn-bûn

@nan

2012年の論文

@ja

2012年学术文章

@wuu

2012年学术文章

@zh-cn

2012年学术文章

@zh-hans

2012年学术文章

@zh-my

2012年学术文章

@zh-sg

2012年學術文章

@yue

2012年學術文章

@zh

2012年學術文章

@zh-hant

name

Complexity of chromatin folding is captured by the strings and binders switch model.

@ast

Complexity of chromatin folding is captured by the strings and binders switch model.

@en

type

label

Complexity of chromatin folding is captured by the strings and binders switch model.

@ast

Complexity of chromatin folding is captured by the strings and binders switch model.

@en

prefLabel

Complexity of chromatin folding is captured by the strings and binders switch model.

@ast

Complexity of chromatin folding is captured by the strings and binders switch model.

@en

P1433

Q36342953-3DD8859B-EBE9-452C-BA03-1C01486848AA

P1476

Q36342953-0D66B228-5969-4DB1-9840-9D0CD668943E

P2093

Q36342953-8F49188D-E334-4ED0-B0CA-EC14FFCB4F50

Q36342953-A885CFD8-DADA-4136-B461-8D55E6969573

Q36342953-C18A477E-B0B6-460D-B7BD-690836F06FCC

Q36342953-D53150BE-38B4-4D65-B38A-6B9F3042D5DB

Q36342953-F5E3FD78-A2E7-4D6D-AB90-8E9358DEF039

P2860

Q36342953-14426C5E-D022-4731-94D1-DA8FC583D09B

Q36342953-16F7D614-C7DB-48AF-9D2E-0B23486EE2A4

Q36342953-180FE200-C0BF-41AE-A107-0E4CA8D493EA

Q36342953-1C298A9C-D688-487F-99FE-45CC4C709F61

Q36342953-1FF7CF3A-C5A8-407B-859F-FB2FF680E971

Q36342953-239C7515-C53A-425D-BDFF-078204B3D760

Q36342953-2A96F1E0-C68C-4E45-9901-56C2F8408F68

Q36342953-37B49797-62C8-47AB-BE96-D276B243D466

Q36342953-4044E705-662F-4E8F-BE31-8B553DAEB824

Q36342953-451AB08B-EF67-42CF-AF23-B0B8A6C56B46

P304

Q36342953-3690A4A9-02A5-4321-8BA8-3BF728F6E29F

P31

Q36342953-2DA92BA7-B81F-45FD-96C2-3A654E77E7A7

P356

Q36342953-28F693C3-E8DB-4741-836C-C42DB8886C07

P407

Q36342953-7694F809-4343-4E87-B2F6-8E08ABCB4526

P433

Q36342953-A91DF05F-81C6-4EB9-B4BD-6F6AF49376C6

P478

Q36342953-2F3A0A4F-D8E3-4E37-9A07-96780D1B3322

P50

Q36342953-8255B2B7-4894-4824-8151-D5EE6D0E8321

Q36342953-FE6476D1-CCCD-4951-9C96-A6CCDAEAD291

P577

Q36342953-DC80A7DC-51C9-478A-8978-34110F322F41

P5875

Q36342953-1AAB976C-BB59-427F-990C-AF289D394337

P698

Q36342953-3094068B-FCEB-44FA-B2CC-B54F4887B810

P932

Q36342953-EB65C070-9635-4D53-9A84-635C3C6643C8

P356

PNAS.1204799109

P1433

Proceedings of the National Academy of Sciences of the United States of America

P1476

Complexity of chromatin folding is captured by the strings and binders switch model.

@en

P2093

James Fraser

http://www.w3.org/2001/XMLSchema#string

Josée Dostie

http://www.w3.org/2001/XMLSchema#string

Liron-Mark Lavitas

http://www.w3.org/2001/XMLSchema#string

Mariano Barbieri

http://www.w3.org/2001/XMLSchema#string

Mita Chotalia

http://www.w3.org/2001/XMLSchema#string

P2860

Diffusion-driven looping provides a consistent framework for chromatin organization

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

Critical DNA binding interactions of the insulator protein CTCF: a small number of zinc fingers mediate strong binding, and a single finger-DNA interaction controls binding at imprinted loci

Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

A thermodynamic switch for chromosome colocalization

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Spatial partitioning of the regulatory landscape of the X-inactivation centre

Compartmentalization of interphase chromosomes observed in simulation and experiment.

Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations

P304

16173-16178

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1073/PNAS.1204799109

http://www.w3.org/2001/XMLSchema#string

P407

P433

40

http://www.w3.org/2001/XMLSchema#string

P478

109

http://www.w3.org/2001/XMLSchema#string

P50

P577

2012-09-17T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

230871863

http://www.w3.org/2001/XMLSchema#string

P698

22988072

http://www.w3.org/2001/XMLSchema#string

P932

3479593

http://www.w3.org/2001/XMLSchema#string