High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
about
Construction and analysis of protein-protein interaction networksReconstruction and Application of Protein-Protein Interaction NetworkEstablishing Chlamydomonas reinhardtii as an industrial biotechnology hostEvolutionary signatures amongst disease genes permit novel methods for gene prioritization and construction of informative gene-based networksEvolutionary rate covariation in meiotic proteins results from fluctuating evolutionary pressure in yeasts and mammalsReconstructing ancestral gene content by coevolutionCovariation of branch lengths in phylogenies of functionally related genesCo-evolutionary networks of genes and cellular processes across fungal speciesPredicting biological networks from genomic dataStructural bioinformatics of the interactome.Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis.Protein co-evolution: how do we combine bioinformatics and experimental approaches?Evolutionary rate covariation identifies new members of a protein network required for Drosophila melanogaster female post-mating responses.Identification of coevolving residues and coevolution potentials emphasizing structure, bond formation and catalytic coordination in protein evolutionPhylogeny-guided interaction mapping in seven eukaryotes.Discovering local patterns of co-evolution: computational aspects and biological examplesComparative classification of species and the study of pathway evolution based on the alignment of metabolic pathwaysInference of functional relations in predicted protein networks with a machine learning approach.PRED_PPI: a server for predicting protein-protein interactions based on sequence data with probability assignment.Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteinsConserved and variable correlated mutations in the plant MADS protein network.ChiPPI: a novel method for mapping chimeric protein-protein interactions uncovers selection principles of protein fusion events in cancer.A novel method to detect proteins evolving at correlated rates: identifying new functional relationships between coevolving proteinsSelection of organisms for the co-evolution-based study of protein interactions.Efficient algorithms for reconstructing gene content by co-evolution.A three-dimensional topology of complex I inferred from evolutionary correlations.Practical aspects of protein co-evolutionEfficient prediction of co-complexed proteins based on coevolutionThe origins of the evolutionary signal used to predict protein-protein interactions.Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp OperonThe role of insulin C-peptide in the coevolution analyses of the insulin signaling pathway: a hint for its functions.Towards the prediction of protein interaction partners using physical dockingRecent coselection in human populations revealed by protein-protein interaction network.Calculation of evolutionary correlation between individual genes and full-length genome: a method useful for choosing phylogenetic markers for molecular epidemiology.Predicting protein-protein interaction by the mirrortree method: possibilities and limitationsMapping proteins in the presence of paralogs using units of coevolution.MSCA: a spectral comparison algorithm between time series to identify protein-protein interactions.Coevolutionary analyses require phylogenetically deep alignments and better null models to accurately detect inter-protein contacts within and between species.Evolutionary rate covariation reveals shared functionality and coexpression of genes.Identification of 14-3-3 Proteins Phosphopeptide-Binding Specificity Using an Affinity-Based Computational Approach.
P2860
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P2860
High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh
2008年學術文章
@zh-hant
name
High-confidence prediction of ...... e-wide coevolutionary networks
@ast
High-confidence prediction of ...... e-wide coevolutionary networks
@en
type
label
High-confidence prediction of ...... e-wide coevolutionary networks
@ast
High-confidence prediction of ...... e-wide coevolutionary networks
@en
prefLabel
High-confidence prediction of ...... e-wide coevolutionary networks
@ast
High-confidence prediction of ...... e-wide coevolutionary networks
@en
P2860
P356
P1476
High-confidence prediction of ...... e-wide coevolutionary networks
@en
P2093
David Juan
Florencio Pazos
P2860
P304
P356
10.1073/PNAS.0709671105
P407
P577
2008-01-16T00:00:00Z