TreeFix: statistically informed gene tree error correction using species trees.
about
Applications of comparative evolution to human disease geneticsTranscriptome sequencing reveals genome-wide variation in molecular evolutionary rate among fernsGenome of the pitcher plant Cephalotus reveals genetic changes associated with carnivoryHorizontal transfer of carbohydrate metabolism genes into ectomycorrhizal Amanita.Poor fit to the multispecies coalescent is widely detectable in empirical data.Rapid Expansion of Immune-Related Gene Families in the House Fly, Musca domestica.Evolution of the 3R-MYB Gene Family in Plants.Duplications and losses in gene families of rust pathogens highlight putative effectors.Efficient exploration of the space of reconciled gene trees.The inference of gene trees with species trees.Refining discordant gene treesToward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees.Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts.Joint amalgamation of most parsimonious reconciled gene treesImproved gene tree error correction in the presence of horizontal gene transferComparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities.Chemoreceptor Evolution in Hymenoptera and Its Implications for the Evolution of Eusociality.Efficient Gene Tree Correction Guided by Genome EvolutionReconciliation feasibility in the presence of gene duplication, loss, and coalescence with multiple individuals per species.Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees.Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution.DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies.Integrated pipeline for inferring the evolutionary history of a gene family embedded in the species tree: a case study on the STIMATE gene family.Polytomy refinement for the correction of dubious duplications in gene trees.Phylogenetic analysis of gene expression.Reconstructing protein and gene phylogenies using reconciliation and soft-clustering.Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.Genome-wide interrogation advances resolution of recalcitrant groups in the tree of life.Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution.GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution.Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.Consistency and convergence rate of phylogenetic inference via regularizationHorizontal operon transfer, plasmids, and the evolution of photosynthesis in RhodobacteraceaeTreeShrink: Efficient Detection of Outlier Tree LeavesRapid Divergence of Genome Architectures Following the Origin of an Ectomycorrhizal Symbiosis in the Genus Amanita
P2860
Q28083558-04A65CCA-5099-41B7-B133-8BD946C219B9Q28596510-33767BA3-F060-4EDD-B9F5-9B204DE48891Q28709882-047FB90F-AC0F-4064-B007-A639F02A50FAQ30368772-9F3A33F3-14B3-49C9-B019-698919C0FFF9Q30663836-9B1AAEDB-7193-44ED-B3EB-1C06DA4184ADQ33590830-AAE217D3-40C9-40C2-811B-34FB6986FA4BQ33603957-41CA8EAA-61D3-451F-AEFF-0DE50471D48AQ33808068-46811C99-C627-4825-A8E8-9104AC4F860FQ34362570-626E70CC-1952-43B5-BE21-CCC5E3F9EA79Q34431226-07253466-F86B-4A80-BAC0-7968DC322D71Q34592364-D3A62DD0-4E8D-41F4-B5E2-D7742B60B4B3Q34740862-F0F8F3D6-4EAC-4F86-82FF-2C75DD18EAE6Q35208575-F7371BC9-C671-4285-B342-E5D9912F7F1DQ35233979-0681B9C2-69BD-45E9-B10B-4B8713766868Q35367107-9C572A1E-A8AF-4488-8A41-4D348A7E6D1CQ35867288-022BCE32-B401-4801-A29C-95679072689EQ36023304-08689EEC-DDEB-43A4-9368-858B1B19F93AQ36101483-9851E1C6-B198-446C-B16E-C042991E78FEQ36393261-F6D7F1C9-6984-4059-AEA5-AB2BA31E3C21Q37614948-6F0E3001-6E0E-403C-A65A-4D82A21097CFQ39196143-162EF65B-61CA-4E16-B9F6-EBC96F1C8423Q41892597-233A72F2-628D-457C-A611-CBB156E7DD24Q42198581-59D9FF88-A5BD-4C3F-88B5-B2E566400FA8Q42848317-07622379-BE34-43D2-9B0C-D4F5B9B52B93Q43377056-CD10C4D9-0560-4BB7-A430-AD945FB406AAQ46255304-F2DFFE6B-B286-4E7E-ABA6-F981E4689E24Q46613613-8C2A8728-FEF6-4FC3-A3A1-EA313668315FQ54022620-521AE046-128C-415C-A121-6D41442C1D50Q54962715-C4165F6D-B944-409A-9D4A-C8ED8A74340DQ55018335-E6A66CA7-2597-4B26-9DD4-3CC1D9F11AF9Q55468172-065CC7AD-FF1E-4B39-9180-0BBA7D82126CQ57824331-FA500B65-9EB1-4BBF-882B-66037522CACCQ58425845-B33C1325-E7A9-4C45-93BB-08F96A7E599AQ58490448-0DF5A735-91AE-4193-A847-8D5F62C840F7Q59132732-37027084-F317-480E-BE25-D0C263EF6246
P2860
TreeFix: statistically informed gene tree error correction using species trees.
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年学术文章
@wuu
2012年学术文章
@zh-cn
2012年学术文章
@zh-hans
2012年学术文章
@zh-my
2012年学术文章
@zh-sg
2012年學術文章
@yue
2012年學術文章
@zh
2012年學術文章
@zh-hant
name
TreeFix: statistically informed gene tree error correction using species trees.
@ast
TreeFix: statistically informed gene tree error correction using species trees.
@en
type
label
TreeFix: statistically informed gene tree error correction using species trees.
@ast
TreeFix: statistically informed gene tree error correction using species trees.
@en
prefLabel
TreeFix: statistically informed gene tree error correction using species trees.
@ast
TreeFix: statistically informed gene tree error correction using species trees.
@en
P2093
P2860
P356
P1433
P1476
TreeFix: statistically informed gene tree error correction using species trees.
@en
P2093
Matthew D Rasmussen
Mukul S Bansal
Yi-Chieh Wu
P2860
P304
P356
10.1093/SYSBIO/SYS076
P577
2012-09-04T00:00:00Z