The multiassembly problem: reconstructing multiple transcript isoforms from EST fragment mixtures.
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The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal speciesAnalysis of alternative splicing with microarrays: successes and challengesAlternative splicing and protein functionGeneration and analysis of the expressed sequence tags from the mycelium of Ganoderma lucidumComprehensive analysis of alternative splicing in rice and comparative analyses with ArabidopsisPrimerSeq: Design and visualization of RT-PCR primers for alternative splicing using RNA-seq data.Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat.Functional importance of different patterns of correlation between adjacent cassette exons in human and mouse.Comparative analysis indicates that alternative splicing in plants has a limited role in functional expansion of the proteome.Gene and alternative splicing annotation with AIR.The multiplicity of alternative splicing decisions in Caenorhabditis elegans is linked to specific intronic regulatory motifs and minisatellites.ECgene: genome-based EST clustering and gene modeling for alternative splicingGenome-wide assembly and analysis of alternative transcripts in mouseRCDA: a highly sensitive and specific alternatively spliced transcript assembly tool featuring upstream consecutive exon structuresOptimal antisense target reducing INS intron 1 retention is adjacent to a parallel G quadruplex.SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data.PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a textVerifying expressed transcript variants by detecting and assembling stretches of consecutive exonsComparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq.SpliceSeq: a resource for analysis and visualization of RNA-Seq data on alternative splicing and its functional impacts.An expectation-maximization algorithm for probabilistic reconstructions of full-length isoforms from splice graphs.A novel min-cost flow method for estimating transcript expression with RNA-SeqMITIE: Simultaneous RNA-Seq-based transcript identification and quantification in multiple samples.Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAsOn the complexity of Minimum Path Cover with Subpath Constraints for multi-assembly.SpliceDisease database: linking RNA splicing and diseaseDeciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elementsLaser-assisted proteolysis for accelerating and enhancing protein N-termini analysis.Functional coordination of alternative splicing in the mammalian central nervous systemTMEM16A alternative splicing coordination in breast cancer.Pediatric pharmacogenetic and pharmacogenomic studies: the current state and future perspectives.A mass graph-based approach for the identification of modified proteoforms using top-down tandem mass spectra.Inference of isoforms from short sequence reads.Evolution of alternative splicing after gene duplication.Protein silencing with Phylomers: a new tool for target validation and generating lead biologicals targeting protein interactions.
P2860
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P2860
The multiassembly problem: reconstructing multiple transcript isoforms from EST fragment mixtures.
description
2004 nî lūn-bûn
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2004年の論文
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2004年学术文章
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2004年学术文章
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2004年学术文章
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2004年学术文章
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name
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@ast
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@en
type
label
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@ast
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@en
prefLabel
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@ast
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@en
P2093
P2860
P356
P1433
P1476
The multiassembly problem: rec ...... ms from EST fragment mixtures.
@en
P2093
Alissa Resch
Christopher Lee
P2860
P304
P356
10.1101/GR.1304504
P577
2004-02-12T00:00:00Z