Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray - Wikidata - awgldk - TriplyDB

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

http://www.wikidata.org/entity/Q36670000

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A six months exercise intervention influences the genome-wide DNA methylation pattern in human adipose tissue X chromosome-wide analysis identifies DNA methylation sites influenced by cigarette smoking Establishing an analytic pipeline for genome-wide DNA methylation DNA Methylation Analysis: Choosing the Right Method Review of processing and analysis methods for DNA methylation array data Genome-wide epigenomic profiling for biomarker discovery Emerging technologies for studying DNA methylation for the molecular diagnosis of cancer Tumor hypomethylation at 6p21.3 associates with longer time to recurrence of high-grade serous epithelial ovarian cancer Mosaic epigenetic dysregulation of ectodermal cells in autism spectrum disorder Differential DNA methylation in umbilical cord blood of infants exposed to mercury and arsenic in utero Lead exposure induces changes in 5-hydroxymethylcytosine clusters in CpG islands in human embryonic stem cells and umbilical cord blood Sex differences in DNA methylation assessed by 450 K BeadChip in newborns Epigenomics and allergic disease Epigenome data release: a participant-centered approach to privacy protection Differential DNA methylation and PM2.5 species in a 450K epigenome-wide association study Genome-wide site-specific differential methylation in the blood of individuals with Klinefelter syndrome Associating cellular epigenetic models with human phenotypes 5-Hydroxymethylcytosine localizes to enhancer elements and is associated with survival in glioblastoma patients.Many obesity-associated SNPs strongly associate with DNA methylation changes at proximal promoters and enhancers.H3K4me1 marks DNA regions hypomethylated during aging in human stem and differentiated cells Novel region discovery method for Infinium 450K DNA methylation data reveals changes associated with aging in muscle and neuronal pathways.Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data Functional normalization of 450k methylation array data improves replication in large cancer studies.Between-array normalization for 450K data.A coherent approach for analysis of the Illumina HumanMethylation450 BeadChip improves data quality and performance in epigenome-wide association studies.Cell-composition effects in the analysis of DNA methylation array data: a mathematical perspective.Risk of re-identification of epigenetic methylation data: a more nuanced response is needed.Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data.methyLiftover: cross-platform DNA methylation data integration.A cross-package Bioconductor workflow for analysing methylation array data Comparison of pre-processing methodologies for Illumina 450k methylation array data in familial analyses.Cell type specific DNA methylation in cord blood: A 450K-reference data set and cell count-based validation of estimated cell type composition "Gap hunting" to characterize clustered probe signals in Illumina methylation array data An epigenetic signature in peripheral blood associated with the haplotype on 17q21.31, a risk factor for neurodegenerative tauopathy.Genome-wide methylation data mirror ancestry information.Longitudinal analyses of the DNA methylome in deployed military servicemen identify susceptibility loci for post-traumatic stress disorder Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes DNA methylation landscape of ocular tissue relative to matched peripheral blood.Longitudinal study of surrogate aging measures during human immunodeficiency virus seroconversion.Methylome-wide association study of whole blood DNA in the Norfolk Island isolate identifies robust loci associated with age.

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Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

http://www.wikidata.org/entity/Q36670000

description

2013 nî lūn-bûn

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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2013年论文

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2013年论文

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name

Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Discovery of cross-reactive pr ...... HumanMethylation450 microarray

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Brent W Zanke

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Darci T Butcher

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Daria Grafodatskaya

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Mathieu Lemire

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Rosanna Weksberg

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Sanaa Choufani

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Thomas J Hudson

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Yi-an Chen

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P2860

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips

A map of human genome variation from population-scale sequencing

BLAT--the BLAST-like alignment tool

Cancer epigenetics comes of age

A study of the influence of sex on genome wide methylation.

Aberrant DNA methylation of p57KIP2 identifies a cell-cycle regulatory pathway with prognostic impact in adult acute lymphocytic leukemia.

Parental ages and levels of DNA methylation in the newborn are correlated.

Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.

DNA methylation signatures in development and aging of the human prefrontal cortex.

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10.4161/EPI.23470

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2

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8

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Steven Gallinger

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2013-01-11T00:00:00Z

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234123843

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23314698

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3592906

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