Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice - Wikidata - awgldk - TriplyDB

Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice

Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice

http://www.wikidata.org/entity/Q36685118

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The Genomes of Oryza sativa: a history of duplications Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium The banana (Musa acuminata) genome and the evolution of monocotyledonous plants Detection of transposable elements by their compositional bias Diaspora, a large family of Ty3-gypsy retrotransposons in Glycine max, is an envelope-less member of an endogenous plant retrovirus lineage Ecological and genetic factors linked to contrasting genome dynamics in seed plants Evolution of plant genome architecture Identification and characterization of abundant repetitive sequences in Eragrostis tef cv. Enatite genome Exploring the rice dispensable genome using a metagenome-like assembly strategy Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution Evolution of centromeric retrotransposons in grasses Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution Comparison of homoeolocus organisation in paired BAC clones from white clover (Trifolium repens L.) and microcolinearity with model legume species Active miniature transposons from a plant genome and its nonrecombining Y chromosome Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes Plant genomes enclose footprints of past infections by giant virus relatives Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome Maize centromere structure and evolution: sequence analysis of centromeres 2 and 5 reveals dynamic Loci shaped primarily by retrotransposons.Long Terminal Repeat Retrotransposon Content in Eight Diploid Sunflower Species Inferred from Next-Generation Sequence Data.Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries.P elements and MITE relatives in the whole genome sequence of Anopheles gambiae De novo identification of LTR retrotransposons in eukaryotic genomes LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss.Transposable element distribution, abundance and role in genome size variation in the genus Oryza.Alu recombination-mediated structural deletions in the chimpanzee genome.A phylogenetic analysis of indel dynamics in the cotton genus.Genomic plasticity and the diversity of polyploid plants.Adaptive and nonadaptive genome size evolution in Karst endemic flora of China.Intergenic locations of rice centromeric chromatin.Dynamic evolution of oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set.A new family of Ty1-copia-like retrotransposons originated in the tomato genome by a recent horizontal transfer event An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes.Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.Evolution of ribosomal DNA-derived satellite repeat in tomato genome Detailed analysis of a contiguous 22-Mb region of the maize genome.Molecular characterization of the Sasanda LTR copia retrotransposon family uncovers their recent amplification in Triticum aestivum (L.) genome.SoyTEdb: a comprehensive database of transposable elements in the soybean genome The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome.The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

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Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice

http://www.wikidata.org/entity/Q36685118

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2004 nî lūn-bûn

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Analyses of LTR-retrotransposo ...... rapid genomic DNA loss in rice

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Jeffrey L Bennetzen

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Jianxin Ma

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Katrien M Devos

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P2860

Evidence for DNA Loss as a Determinant of Genome Size

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

Long terminal repeat retrotransposons of Oryza sativa.

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

MEGA2: molecular evolutionary genetics analysis software

Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes

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