RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
about
DotKnot: pseudoknot prediction using the probability dot plot under a refined energy modelSalt dependence of nucleic acid hairpin stabilityUnderstanding nucleic acid-ion interactionsComputational analysis of noncoding RNAsConformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complexCharge Shielding of PIP2 by Cations Regulates Enzyme Activity of Phospholipase CA magnesium-induced RNA conformational switch at the internal ribosome entry site of hepatitis C virus genome visualized by atomic force microscopyMagnesium fluctuations modulate RNA dynamics in the SAM-I riboswitch.An in vitro translation, selection and amplification system for peptide nucleic acidsSalt-dependent folding energy landscape of RNA three-way junction.Native mRNA antisense-accessible sites library for the selection of antisense oligonucleotides, PNAs, and siRNAs.RNA structure determination using SAXS data.Predicting loop-helix tertiary structural contacts in RNA pseudoknots.RPI-Bind: a structure-based method for accurate identification of RNA-protein binding sites.Folding and unfolding single RNA molecules under tension.Predicting secondary structural folding kinetics for nucleic acids.Computing the partition function for kinetically trapped RNA secondary structures.Extended structures in RNA folding intermediates are due to nonnative interactions rather than electrostatic repulsion.Predicting ion binding properties for RNA tertiary structures.Mg2+ effect on argonaute and RNA duplex by molecular dynamics and bioinformatics implications.Assembly and activation of a kinase ribozymeStrategies for articulated multibody-based adaptive coarse grain simulation of RNA.Free-energy calculations for semi-flexible macromolecules: applications to DNA knotting and looping.Salt contribution to RNA tertiary structure folding stabilityPharmacological characterization of chemically synthesized monomeric phi29 pRNA nanoparticles for systemic delivery.RPI-Pred: predicting ncRNA-protein interaction using sequence and structural informationMemory-efficient RNA energy landscape exploration.A conserved RNA pseudoknot in a putative molecular switch domain of the 3'-untranslated region of coronaviruses is only marginally stable.Rational truncation of an RNA aptamer to prostate-specific membrane antigen using computational structural modeling.Structure and stability of RNA/RNA kissing complex: with application to HIV dimerization initiation signalRNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures.A Method to Predict the 3D Structure of an RNA ScaffoldFree energy landscape and multiple folding pathways of an H-type RNA pseudoknot.3dRNAscore: a distance and torsion angle dependent evaluation function of 3D RNA structuresMultivalent ion-mediated nucleic acid helix-helix interactions: RNA versus DNA.RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure predictionRNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiaeStructure Prediction of RNA Loops with a Probabilistic ApproachTemplate-Based Modeling of Protein-RNA InteractionsIon-mediated RNA structural collapse: effect of spatial confinement.
P2860
Q24597768-E8366C91-0712-4FF3-A04B-6EF539F1B600Q24650345-80CEB894-CFA0-4D18-9B46-DAFD9C822FC8Q26822427-D501868A-8D60-4BB5-83BC-F2C5A980C70DQ27014185-8CE75A85-783B-4B08-A0D4-F166AC014F8AQ27663735-790CB751-2DC5-4886-90A9-6CB863ECE9E0Q28551491-9D7D6DAA-9DB9-491E-99C4-C476088A804BQ30418471-AF54F20E-6DC9-417B-9746-D6AB6FECB388Q30540399-618C1D06-4819-447E-8C41-E13682AF3678Q33524784-871A60B2-152A-43A4-8FBD-1F516344F055Q33568362-0CD3B207-4C74-4E05-A711-4B34A05EB972Q33586043-93A1A9E4-9B40-4F26-B4CC-A393C3632EE1Q33649084-ADFC95A2-EA1D-4E61-AE62-569A60F1BCB0Q33658469-0EA14EAB-7BAE-4A7B-B6C6-C94A366EBE0AQ33677541-287446A7-82F8-4DE0-8D97-B82631B0D409Q33791724-F9C1475F-6E66-4765-AC6C-810E04EDFB88Q33795566-3A232979-82F6-45B2-A632-AE08E1BEE424Q33813019-5D5879FC-18CD-4F4A-875F-389C7F5B92E6Q33862835-6DF01A64-0813-44B9-A787-31EE8FACD15BQ34099007-67B6DCC3-6B42-4A2D-A0C7-00366621147AQ34361781-20081D2D-C0B0-4414-B95F-AA8319D6226AQ34370093-7326320A-2F71-48C0-953F-B86C05B98F95Q34519518-E4C97A21-FFFC-4E96-9B32-8134D2CB25C9Q34562935-0C50EFF6-BE64-4CF8-B8C4-790927CD545CQ35079364-80D833B6-9261-4C47-AA2D-DFCDA2E1CCF7Q35086107-23318A9A-F85B-4AE8-9EDF-52211652A6A8Q35089055-55F85330-9EB7-4E3C-A7BE-D460E52790E0Q35169715-6C652E0C-0F48-4324-B5B7-BA7266E79A32Q35182683-209C6DC9-BB30-4FE6-B108-6AD2D56AB384Q35413768-5827662F-3FEA-4C3A-938C-A894E5643AC4Q35567471-8BC67755-DBD8-41FA-899E-C122E687585EQ35621422-B49156AA-986C-4370-9580-D6EF5FAAD3BAQ35628460-E7E1F65B-E4C0-48CF-BF23-3ABC75C7DF7EQ35647681-F03715AD-F76F-4E25-8680-78B5AC9B38D0Q35656687-BE7C4DF7-F27B-4D67-AA6B-18DE1EA032E1Q35842560-B43CDD76-A84E-41CA-BAB1-4CB2AE8123C3Q35853409-D904E80C-5E47-4EE7-8DB4-944BEE073746Q35981884-05CBC22B-B48F-41ED-A0B3-369DA2943525Q36096150-C7A701B3-D50E-4430-99C1-5B10C5E07EB8Q36142987-98BFBCBC-2883-4C43-82CF-A93D2EA8DCE0Q36238166-732BEDC2-84B4-44B7-8328-2AB9DD5B938E
P2860
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@ast
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@en
type
label
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@ast
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@en
prefLabel
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@ast
RNA folding: conformational statistics, folding kinetics, and ion electrostatics.
@en
P2860
P1476
RNA folding: conformational statistics, folding kinetics, and ion electrostatics
@en
P2093
Shi-Jie Chen
P2860
P304
P356
10.1146/ANNUREV.BIOPHYS.37.032807.125957
P50
P577
2008-01-01T00:00:00Z