Insight into the role of Mg in hammerhead ribozyme catalysis from X-ray crystallography and molecular dynamics simulation.
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Solvent Structure and Hammerhead Ribozyme CatalysisA Two-Metal-Ion-Mediated Conformational Switching Pathway for HDV Ribozyme ActivationComputational mutagenesis studies of hammerhead ribozyme catalysis.Active participation of Mg ion in the reaction coordinate of RNA self-cleavage catalyzed by the hammerhead ribozyme.Characterization of the Structure and Dynamics of the HDV Ribozyme at Different Stages Along the Reaction Path.Ground-state coordination of a catalytic metal to the scissile phosphate of a tertiary-stabilized Hammerhead ribozyme.Assessment of metal-assisted nucleophile activation in the hepatitis delta virus ribozyme from molecular simulation and 3D-RISM.Bridging the gap between theory and experiment to derive a detailed understanding of hammerhead ribozyme catalysis.Role of Mg2+ in hammerhead ribozyme catalysis from molecular simulationQuantum mechanical/molecular mechanical simulation study of the mechanism of hairpin ribozyme catalysisThreshold occupancy and specific cation binding modes in the hammerhead ribozyme active site are required for active conformation.Extension of adaptive tree code and fast multipole methods to high angular momentum particle charge densities.Origin of mutational effects at the C3 and G8 positions on hammerhead ribozyme catalysis from molecular dynamics simulations.Theoretical studies of RNA catalysis: hybrid QM/MM methods and their comparison with MD and QM.Divalent Metal Ion Activation of a Guanine General Base in the Hammerhead Ribozyme: Insights from Molecular Simulations.RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.
P2860
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P2860
Insight into the role of Mg in hammerhead ribozyme catalysis from X-ray crystallography and molecular dynamics simulation.
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article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on March 2007
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Insight into the role of Mg in ...... molecular dynamics simulation.
@en
Insight into the role of Mg in ...... molecular dynamics simulation.
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type
label
Insight into the role of Mg in ...... molecular dynamics simulation.
@en
Insight into the role of Mg in ...... molecular dynamics simulation.
@nl
prefLabel
Insight into the role of Mg in ...... molecular dynamics simulation.
@en
Insight into the role of Mg in ...... molecular dynamics simulation.
@nl
P2093
P2860
P356
P1476
Insight into the role of Mg in ...... molecular dynamics simulation.
@en
P2093
Carlos Silva López
Monika Martick
Tai-Sung Lee
William G Scott
P2860
P304
P356
10.1021/CT6003142
P577
2007-03-01T00:00:00Z