Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer. - Wikidata - awgldk - TriplyDB

Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer.

Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer.

http://www.wikidata.org/entity/Q37036292

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Innovations in proteomic profiling of cancers: alternative splice variants as a new class of cancer biomarker candidates and bridging of proteomics with structural biology Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions The emerging era of genomic data integration for analyzing splice isoform function Overexpression of Rad51C splice variants in colorectal tumors Proteogenomics: concepts, applications and computational strategies Proteomic characterization of novel alternative splice variant proteins in human epidermal growth factor receptor 2/neu-induced breast cancers A compatible exon-exon junction database for the identification of exon skipping events using tandem mass spectrum data.An integrated mass-spectrometry pipeline identifies novel protein coding-regions in the human genome Template proteogenomics: sequencing whole proteins using an imperfect database.A new class of protein cancer biomarker candidates: differentially expressed splice variants of ERBB2 (HER2/neu) and ERBB1 (EGFR) in breast cancer cell lines Identification of alternatively spliced transcripts using a proteomic informatics approach Mapping Splicing Quantitative Trait Loci in RNA-Seq.Integrating genomic, transcriptomic, and interactome data to improve Peptide and protein identification in shotgun proteomics.Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence.A proteogenomic analysis of Anopheles gambiae using high-resolution Fourier transform mass spectrometry.Identification of sialylated glycoproteins from metabolically oligosaccharide engineered pancreatic cells.Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level.Surveying the serologic proteome in a tissue-specific kras(G12D) knockin mouse model of pancreatic cancer.Proteomics analysis of bodily fluids in pancreatic cancer Difference gel electrophoresis identifies differentially expressed proteins in endoscopically collected pancreatic fluid Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function.Moving from unsequenced to sequenced genome: reanalysis of the proteome of Leishmania donovani.Decreased Serum Thrombospondin-1 Levels in Pancreatic Cancer Patients Up to 24 Months Prior to Clinical Diagnosis: Association with Diabetes Mellitus.Plasma proteomics, the Human Proteome Project, and cancer-associated alternative splice variant proteins.Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-Seq Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation Strategies for Genomic and Proteomic Profiling of Cancers.Distinct splice variants and pathway enrichment in the cell-line models of aggressive human breast cancer subtypes Proteogenomics.Neglected markers: altered serum proteome in murine models of disease.Profiling proteoforms: promising follow-up of proteomics for biomarker discovery.Metabolic rewiring of pancreatic ductal adenocarcinoma: New routes to follow within the maze.Tutorial on Protein Ontology Resources.Proteogenomics for understanding oncology: recent advances and future prospects.Glucose metabolic phenotype of pancreatic cancer.Evaluating the potential of a novel oral lesion exudate collection method coupled with mass spectrometry-based proteomics for oral cancer biomarker discovery.Investigating protein isoforms via proteomics: a feasibility study.Splice variants as novel targets in pancreatic ductal adenocarcinoma.Mouse-specific tandem IgY7-SuperMix immunoaffinity separations for improved LC-MS/MS coverage of the plasma proteome.A proteogenomic approach to map the proteome of an unsequenced pathogen - Leishmania donovani.

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P2860

Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer.

http://www.wikidata.org/entity/Q37036292

description

article científic

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article scientifique

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articolo scientifico

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artigo científico

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bilimsel makale

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scientific article published on January 2009

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vedecký článok

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vetenskaplig artikel

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videnskabelig artikel

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vědecký článek

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name

Identification of novel altern ...... el of human pancreatic cancer.

@en

Identification of novel altern ...... el of human pancreatic cancer.

@nl

type

label

Identification of novel altern ...... el of human pancreatic cancer.

@en

Identification of novel altern ...... el of human pancreatic cancer.

@nl

prefLabel

Identification of novel altern ...... el of human pancreatic cancer.

@en

Identification of novel altern ...... el of human pancreatic cancer.

@nl

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0008-5472.CAN-08-2145

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Cancer Research

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Identification of novel altern ...... el of human pancreatic cancer.

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Chunxia Lu

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Damian Fermin

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David J States

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Nabeel Bardeesy

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Qing Zhang

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Rajasree Menon

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Ronald A DePinho

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Samir M Hanash

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Yan Zhang

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P2860

Identification and characterization of K12 (SECTM1), a novel human gene that encodes a Golgi-associated protein with transmembrane and secreted isoforms

ECgene: genome annotation for alternative splicing

BLAT--the BLAST-like alignment tool

Pyruvate kinase M2 is a phosphotyrosine-binding protein

Correlation between protein and mRNA abundance in yeast

Oxidative metabolism in cancer growth

Biomarker discovery from pancreatic cancer secretome using a differential proteomic approach

Tumor M2-pyruvate kinase, a new metabolic marker for pancreatic cancer

Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry.

The M2 splice isoform of pyruvate kinase is important for cancer metabolism and tumour growth

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Nabeel Bardeesy

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