Protein model structure evaluation using the solvation free energy of folding.
about
VADAR: a web server for quantitative evaluation of protein structure qualityKnowledge-based model building of proteins: concepts and examplesCharacterization of the cofactor-binding site in the SPOUT-fold methyltransferases by computational docking of S-adenosylmethionine to three crystal structuresStructural and functional studies on a mesophilic stationary phase survival protein (Sur E) from Salmonella typhimuriumKnowledge-Based Protein ModelingMolecular modeling and characterization of the B. thuringiensis and B. thuringiensis LDC-9 cytolytic proteins.Statistical potentials for fold assessment.Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys.Effect of Structural Changes in Proteins Derived from GATA4 Nonsynonymous Single Nucleotide Polymorphisms in Congenital Heart Disease.Determining protein similarity by comparing hydrophobic core structure.Molecular modeling and characterization of Vibrio cholerae transcription regulator HlyUAnalysis of protein sequence/structure similarity relationships.In silico structure-based screening of versatile P-glycoprotein inhibitors using polynomial empirical scoring functions.Molecular dynamics studies of a DNA-binding protein: 2. An evaluation of implicit and explicit solvent models for the molecular dynamics simulation of the Escherichia coli trp repressor.Comparison of atomic solvation parametric sets: applicability and limitations in protein folding and binding.In search for more accurate alignments in the twilight zone.Inhibition of Golgi mannosidase II with mannostatin A analogues: synthesis, biological evaluation, and structure-activity relationship studies.Computational challenges for macromolecular structure determination by X-ray crystallography and solution NMR-spectroscopy.Structures of protein complexes by multidimensional heteronuclear magnetic resonance spectroscopy.In silico predictive model to determine vector-mediated transport properties for the blood-brain barrier choline transporter.Comparative modeling of the three-dimensional structure of type II antifreeze proteinCorrelation functions as a tool for protein modeling and structure analysis.Inclusion of solvation free energy with molecular mechanics energy: alanyl dipeptide as a test case.Identification, characterization, and inhibition of Plasmodium falciparum beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ).Distinguishing native conformations of proteins from decoys with an effective free energy estimator based on the OPLS all-atom force field and the Surface Generalized Born solvent model
P2860
Q24672199-E7DFCD8F-BE13-4144-A694-64B1D0089798Q24676038-1B7C206F-C36E-4A57-AF62-8796D2A879AEQ24792280-D80EFC63-DF1F-4DB3-8EDA-A3C691345A2AQ27652958-ED3F53DE-2E66-45A9-BACC-12A1D77CEDE3Q28315523-21653104-F40E-485D-813D-DC35C2B18116Q30157511-3A692B28-8FEA-468B-84FD-41A097F38487Q30329417-E440406D-3419-4B05-824A-E63037DD1C62Q30373776-57155532-7F3B-4C2D-A259-9D64E1036127Q30385872-6BC9CFFC-647E-4936-A91E-45D48B816A5EQ30398892-D67FEFDD-5629-4FA0-8B69-267079845F2DQ33264121-E777A791-4F0C-49DE-A3D6-E5E801E0B0D3Q34179225-C2BE787B-27E6-4223-A2FA-679C1C445E58Q34414201-687BC89A-AEB6-4B98-AEC8-13D20A457F4CQ36277519-21730FFD-D0A8-406E-A3AE-D79C80EED39AQ36278991-0A4DC545-84AB-4118-8925-B7E830732DF9Q38270100-712CEDCF-71EE-4B2E-B600-B50516B8C21DQ38336676-29D7253C-67E2-4073-A671-76CD63D09CA7Q40766113-BD3C29DB-285C-4C0D-B090-004B49C16F5EQ40954112-5928E2DE-FB06-4EDE-AFF3-D9457AE204AEQ42010190-26710668-4915-4274-ABE7-7A3210C43CD2Q42026166-30B5E38E-46A5-48B8-8CB5-701057078CB9Q42841859-F1306CE9-7AB9-4804-A8D2-747EC2430682Q42842155-69ACC458-35D8-4368-99A3-714C78A8032AQ47934927-D2B76E65-2FA2-41D1-A9D7-C7C2A8FEFA64Q57134711-86B4957B-F3D5-497D-BD3D-08125372718E
P2860
Protein model structure evaluation using the solvation free energy of folding.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on April 1990
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
Protein model structure evaluation using the solvation free energy of folding.
@en
Protein model structure evaluation using the solvation free energy of folding.
@nl
type
label
Protein model structure evaluation using the solvation free energy of folding.
@en
Protein model structure evaluation using the solvation free energy of folding.
@nl
prefLabel
Protein model structure evaluation using the solvation free energy of folding.
@en
Protein model structure evaluation using the solvation free energy of folding.
@nl
P2093
P2860
P356
P1476
Protein model structure evaluation using the solvation free energy of folding.
@en
P2093
L M Gregoret
P A Kollman
P2860
P304
P356
10.1073/PNAS.87.8.3240
P407
P50
P577
1990-04-01T00:00:00Z