How common is the funnel-like energy landscape in protein-protein interactions?
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Multiscale method for modeling binding phenomena involving large objects: application to kinesin motor domains motion along microtubules.Protein docking by the underestimation of free energy funnels in the space of encounter complexesCan the energy gap in the protein-ligand binding energy landscape be used as a descriptor in virtual ligand screening?The role of geometric complementarity in secondary structure packing: a systematic docking study.Protein-protein alternative binding modes do not overlap.The size of the intermolecular energy funnel in protein-protein interactions.Downhill kinetics of biomolecular interface binding: globally connected scenarioSimulated evolution of protein-protein interaction networks with realistic topology.Protein-protein docking: from interaction to interactomeStudies of biomolecular conformations and conformational dynamics by mass spectrometry.Quantifying the kinetic paths of flexible biomolecular recognition.Chasing funnels on protein-protein energy landscapes at different resolutionsThe ruggedness of protein-protein energy landscape and the cutoff for 1/r(n) potentials.Conformer-specific characterization of nonnative protein states using hydrogen exchange and top-down mass spectrometry.Encounter complexes and dimensionality reduction in protein-protein association.Low-resolution structural modeling of protein interactome.Docking of protein models.Challenges in structural approaches to cell modeling.A combination of rescoring and refinement significantly improves protein docking performanceComputational study for protein-protein docking using global optimization and empirical potentials.Squaring the Circle and Cubing the Sphere: Circular and Spherical CopulasGRAMM-X public web server for protein-protein docking.Monte Carlo simulations of the peptide recognition at the consensus binding site of the constant fragment of human immunoglobulin G: the energy landscape analysis of a hot spot at the intermolecular interface.Dimensionality of Motion and Binding Valency Govern Receptor-Ligand Kinetics As Revealed by Agent-Based Modeling.A Markov-chain model description of binding funnels to enhance the ranking of docked solutions.Structural quality of unrefined models in protein docking.Modeling complexes of modeled proteins.Using a consensus approach based on the conservation of inter-residue contacts to rank CAPRI models.Large-scale structural modeling of protein complexes at low resolution.Protein docking refinement by convex underestimation in the low-dimensional subspace of encounter complexes.Stochastic gating and drug-ribosome interactions.
P2860
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P2860
How common is the funnel-like energy landscape in protein-protein interactions?
description
2001 nî lūn-bûn
@nan
2001年の論文
@ja
2001年論文
@yue
2001年論文
@zh-hant
2001年論文
@zh-hk
2001年論文
@zh-mo
2001年論文
@zh-tw
2001年论文
@wuu
2001年论文
@zh
2001年论文
@zh-cn
name
How common is the funnel-like energy landscape in protein-protein interactions?
@en
type
label
How common is the funnel-like energy landscape in protein-protein interactions?
@en
prefLabel
How common is the funnel-like energy landscape in protein-protein interactions?
@en
P2860
P356
P1433
P1476
How common is the funnel-like energy landscape in protein-protein interactions?
@en
P2093
A Tovchigrechko
I A Vakser
P2860
P304
P356
10.1110/PS.8701
P577
2001-08-01T00:00:00Z