A molecular dynamics simulation study of an aminoglycoside/A-site RNA complex: conformational and hydration patterns.
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Connecting the kinetics and energy landscape of tRNA translocation on the ribosomeInterplay of the bacterial ribosomal A-site, S12 protein mutations and paromomycin binding: a molecular dynamics study.Multiple molecular dynamics simulation of the isoforms of human translation elongation factor 1A reveals reversible fluctuations between "open" and "closed" conformations and suggests specific for eEF1A1 affinity for Ca2+-calmodulinAssociation of aminoglycosidic antibiotics with the ribosomal A-site studied with Brownian dynamicsMolecular dynamics study of the ribosomal A-site.Comparing aminoglycoside binding sites in bacterial ribosomal RNA and aminoglycoside modifying enzymes.Search for novel aminoglycosides by combining fragment-based virtual screening and 3D-QSAR scoringMethods to enable the design of bioactive small molecules targeting RNA.Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EMUnderstanding the origins of bacterial resistance to aminoglycosides through molecular dynamics mutational study of the ribosomal A-site.A computational investigation on the connection between dynamics properties of ribosomal proteins and ribosome assemblyElectrostatic interactions in aminoglycoside-RNA complexes.Free-energy landscape of reverse tRNA translocation through the ribosome analyzed by electron microscopy density maps and molecular dynamics simulations.Nucleotide modifications and tRNA anticodon-mRNA codon interactions on the ribosomeMolecular dynamics simulations of RNA: an in silico single molecule approach.Computational studies of molecular machines: the ribosome.Raman crystallography of RNA.DFT and MD study of the divalent-cation-mediated interaction of ochratoxin A with DNA nucleosides.Insights into protein - DNA interactions, stability and allosteric communications: a computational study of mutSα-DNA recognition complexesMetal binding motif in the active site of the HDV ribozyme binds divalent and monovalent ions.RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.Stochastic gating and drug-ribosome interactions.Unveiling the unfolding pathway of F5F8D disorder-associated D81H/V100D mutant of MCFD2 via multiple molecular dynamics simulations.Use of a redox probe for an electrochemical RNA-ligand binding assay in microliter droplets.Insight into nucleic acid counterion interactions from inside molecular dynamics simulations is “worth its salt”
P2860
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P2860
A molecular dynamics simulation study of an aminoglycoside/A-site RNA complex: conformational and hydration patterns.
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
2006年论文
@zh
2006年论文
@zh-cn
name
A molecular dynamics simulatio ...... tional and hydration patterns.
@en
type
label
A molecular dynamics simulatio ...... tional and hydration patterns.
@en
prefLabel
A molecular dynamics simulatio ...... tional and hydration patterns.
@en
P2093
P1433
P1476
A molecular dynamics simulatio ...... tional and hydration patterns.
@en
P2093
P304
P356
10.1016/J.BIOCHI.2006.06.006
P577
2006-06-22T00:00:00Z