Salmon provides fast and bias-aware quantification of transcript expression
about
Chromosomal dynamics predicted by an elastic network model explains genome-wide accessibility and long-range couplingsA high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing.Integration of quantitated expression estimates from polyA-selected and rRNA-depleted RNA-seq librariesIdentification of long non-coding RNA in the horse transcriptome.Evolutionary loss of melanogenesis in the tunicate Molgula occulta.Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data.Gene length and detection bias in single cell RNA sequencing protocols.Integrative genomic analyses for identification and prioritization of long non-coding RNAs associated with autism.YY1 Haploinsufficiency Causes an Intellectual Disability Syndrome Featuring Transcriptional and Chromatin Dysfunction.A three enzyme system to generate the Strychnos alkaloid scaffold from a central biosynthetic intermediate.Comparison of alternative approaches for analysing multi-level RNA-seq data.Evaluation and comparison of computational tools for RNA-seq isoform quantification.SuperTranscripts: a data driven reference for analysis and visualisation of transcriptomes.Reference standards for next-generation sequencing.Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis.Assessment of engineered cells using CellNet and RNA-seq.Severe acute dehydration in a desert rodent elicits a transcriptional response that effectively prevents kidney injury.Stochastic principles governing alternative splicing of RNA.Local sequence and sequencing depth dependent accuracy of RNA-seq reads.Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination.Splatter: simulation of single-cell RNA sequencing data.Long noncoding RNAs in the model species Brachypodium distachyon.stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usage.Cell-Type-Specific Translation Profiling Reveals a Novel Strategy for Treating Fragile X Syndrome.De novo transcriptome assembly for the spiny mouse (Acomys cahirinus).Exome-capture RNA sequencing of decade-old breast cancers and matched decalcified bone metastasesMammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism.Alignment-free sequence comparison: benefits, applications, and tools.Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana.Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility.A heterochromatin-dependent transcription machinery drives piRNA expression.Quark enables semi-reference-based compression of RNA-seq data.Improved data-driven likelihood factorizations for transcript abundance estimation.RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.Elucidating the Role of Host Long Non-Coding RNA during Viral Infection: Challenges and Paths Forward.Neuromedin B expression defines the mouse retrotrapezoid nucleus.PMP22 antisense oligonucleotides reverse Charcot-Marie-Tooth disease type 1A features in rodent models.A Dramatic Difference in Global Gene Expression between TCDD-Treated Atlantic Tomcod Larvae from the Resistant Hudson River and a Nearby Sensitive Population.FreePSI: an alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome.Central nervous system transcriptome of Biomphalaria alexandrina, an intermediate host for schistosomiasis.
P2860
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P2860
Salmon provides fast and bias-aware quantification of transcript expression
description
2017 nî lūn-bûn
@nan
2017年の論文
@ja
2017年論文
@yue
2017年論文
@zh-hant
2017年論文
@zh-hk
2017年論文
@zh-mo
2017年論文
@zh-tw
2017年论文
@wuu
2017年论文
@zh
2017年论文
@zh-cn
name
Salmon provides fast and bias-aware quantification of transcript expression
@en
type
label
Salmon provides fast and bias-aware quantification of transcript expression
@en
prefLabel
Salmon provides fast and bias-aware quantification of transcript expression
@en
P2093
P2860
P356
P1433
P1476
Salmon provides fast and bias-aware quantification of transcript expression
@en
P2093
Carl Kingsford
Geet Duggal
Rafael A Irizarry
P2860
P2888
P304
P356
10.1038/NMETH.4197
P577
2017-03-06T00:00:00Z
P6179
1084129290