Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
about
Discovering novel cis-regulatory motifs using functional networksGenome wide prediction of HNF4alpha functional binding sites by the use of local and global sequence contextA reexamination of information theory-based methods for DNA-binding site identificationExpression of human frataxin is regulated by transcription factors SRF and TFAP2Computational prediction of transcription-factor binding site locationsA survey of DNA motif finding algorithmsScoring functions for transcription factor binding site predictionAb initio identification of putative human transcription factor binding sites by comparative genomicsTranscriptional regulation of protein complexes in yeastCorrelating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotesComputational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrepresented upstream motifsBioinformatic identification of novel regulatory DNA sequence motifs in Streptomyces coelicolorEvaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNAGenome wide identification of regulatory motifs in Bacillus subtilisLimitations and potentials of current motif discovery algorithms.BIPAD: a web server for modeling bipartite sequence elements.Assessing computational tools for the discovery of transcription factor binding sitesAn improved map of conserved regulatory sites for Saccharomyces cerevisiae.A survey of motif finding Web tools for detecting binding site motifs in ChIP-Seq data.A review of ensemble methods for de novo motif discovery in ChIP-Seq data.Clustering and re-clustering for pattern discovery in gene expression data.Flexible promoter architecture requirements for coactivator recruitment.Bounded search for de novo identification of degenerate cis-regulatory elements.Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm.Detection of prokaryotic promoters from the genomic distribution of hexanucleotide pairs.Cis-motifs upstream of the transcription and translation initiation sites are effectively revealed by their positional disequilibrium in eukaryote genomes using frequency distribution curvesStatistical significance of cis-regulatory modules.A novel ensemble learning method for de novo computational identification of DNA binding sites.rMotifGen: random motif generator for DNA and protein sequences.EDISA: extracting biclusters from multiple time-series of gene expression profiles.SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences.The LysR-type transcriptional regulator LeuO controls expression of several genes in Salmonella enterica serovar TyphiEvaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolutionSIGffRid: a tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics.Predicted transcription factor binding sites as predictors of operons in Escherichia coli and Streptomyces coelicolor.Extracting transcription factor binding sites from unaligned gene sequences with statistical models.Identifying regulatory elements in eukaryotic genomes.Variable structure motifs for transcription factor binding sites.ModuleOrganizer: detecting modules in families of transposable elements.Identification of the binding sites of regulatory proteins in bacterial genomes
P2860
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P2860
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
description
2000 nî lūn-bûn
@nan
2000年の論文
@ja
2000年論文
@yue
2000年論文
@zh-hant
2000年論文
@zh-hk
2000年論文
@zh-mo
2000年論文
@zh-tw
2000年论文
@wuu
2000年论文
@zh
2000年论文
@zh-cn
name
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
@en
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.
@nl
type
label
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
@en
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.
@nl
prefLabel
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
@en
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.
@nl
P2860
P356
P1476
Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
@en
P2093
Collado-Vides J
P2860
P304
P356
10.1093/NAR/28.8.1808
P407
P577
2000-04-01T00:00:00Z