Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model.
about
Consequences of eukaryotic enhancer architecture for gene expression dynamics, development, and fitnessGene regulatory networks for developmentComputational prediction of transcription-factor binding site locationsBiologicalNetworks 2.0--an integrative view of genome biology data.Stubb: a program for discovery and analysis of cis-regulatory modulesGenomic characterization of a repetitive motif strongly associated with developmental genes in DrosophilaComputational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in DrosophilaConservation of regulatory elements between two species of DrosophilaComputational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscuraAssessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expressionTranscriptional control in the segmentation gene network of DrosophilaIdentification of regulatory targets of tissue-specific transcription factors: application to retina-specific gene regulation.An integrated strategy for analyzing the unique developmental programs of different myoblast subtypes.Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cellsLOESS correction for length variation in gene set-based genomic sequence analysis.Detection of regulatory SNPs in human genome using ChIP-seq ENCODE dataIdentification of tissue-specific cis-regulatory modules based on interactions between transcription factors.MORPH: probabilistic alignment combined with hidden Markov models of cis-regulatory modules.Affinity Density: a novel genomic approach to the identification of transcription factor regulatory targetsToucan: deciphering the cis-regulatory logic of coregulated genes.An exploratory data analysis method to reveal modular latent structures in high-throughput data.Formation of regulatory modules by local sequence duplicationMeta-analysis discovery of tissue-specific DNA sequence motifs from mammalian gene expression dataA novel ensemble learning method for de novo computational identification of DNA binding sites.Fine-tuning enhancer models to predict transcriptional targets across multiple genomesPredicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule miningDiRE: identifying distant regulatory elements of co-expressed genes.Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation.Identification and analysis of co-occurrence networks with NetCutter.The complex spatio-temporal regulation of the Drosophila myoblast attractant gene duf/kirre.A cis-regulatory signature for chordate anterior neuroectodermal genes.Imogene: identification of motifs and cis-regulatory modules underlying gene co-regulation.Assessing computational methods of cis-regulatory module prediction.Cis-regulatory mechanisms of gene expression in an olfactory neuron type in Caenorhabditis elegans.Computational identification of transcriptional regulators in human endotoxemiaErroneous attribution of relevant transcription factor binding sites despite successful prediction of cis-regulatory modules.Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny.A machine learning approach for identifying novel cell type-specific transcriptional regulators of myogenesis.Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells.
P2860
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P2860
Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model.
description
2002 nî lūn-bûn
@nan
2002年の論文
@ja
2002年論文
@yue
2002年論文
@zh-hant
2002年論文
@zh-hk
2002年論文
@zh-mo
2002年論文
@zh-tw
2002年论文
@wuu
2002年论文
@zh
2002年论文
@zh-cn
name
Computation-based discovery of ...... validated combinatorial model.
@en
Computation-based discovery of ...... validated combinatorial model.
@nl
type
label
Computation-based discovery of ...... validated combinatorial model.
@en
Computation-based discovery of ...... validated combinatorial model.
@nl
prefLabel
Computation-based discovery of ...... validated combinatorial model.
@en
Computation-based discovery of ...... validated combinatorial model.
@nl
P2093
P2860
P356
P1433
P1476
Computation-based discovery of ...... validated combinatorial model.
@en
P2093
Alan M Michelson
George M Church
Marc S Halfon
Yonatan Grad
P2860
P304
P356
10.1101/GR.228902
P577
2002-07-01T00:00:00Z