Regulatory network of Escherichia coli: consistency between literature knowledge and microarray profiles.
about
An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifsHierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approachSpatial patterns of transcriptional activity in the chromosome of Escherichia coliProkaryotic genome regulation: a revolutionary paradigmFolX and FolM are essential for tetrahydromonapterin synthesis in Escherichia coli and Pseudomonas aeruginosaNetwork reconstruction based on proteomic data and prior knowledge of protein connectivity using graph theoryMulti-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coliDetecting and removing inconsistencies between experimental data and signaling network topologies using integer linear programming on interaction graphs.Augmenting microarray data with literature-based knowledge to enhance gene regulatory network inference.Large-scale comparative genomic ranking of taxonomically restricted genes (TRGs) in bacterial and archaeal genomes.Novel gene sets improve set-level classification of prokaryotic gene expression data.Identification and analysis of DNA-binding transcription factors in Bacillus subtilis and other Firmicutes--a genomic approach.Identification of regulatory network topological units coordinating the genome-wide transcriptional response to glucose in Escherichia coli.Orthologous transcription factors in bacteria have different functions and regulate different genes.Comparing patterns of natural selection across species using selective signaturesDissecting the logical types of network control in gene expression profiles.Linking Cytoscape and the corynebacterial reference database CoryneRegNetInferring the role of transcription factors in regulatory networksRegulon organization of ArabidopsisDISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli.BioQuali Cytoscape plugin: analysing the global consistency of regulatory networksIdentification of network topological units coordinating the global expression response to glucose in Bacillus subtilis and its comparison to Escherichia coliFrom sequence to dynamics: the effects of transcription factor and polymerase concentration changes on activated and repressed promoters.Ranges of control in the transcriptional regulation of Escherichia coli.Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli.Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coliGlobal expression of prophage genes in Escherichia coli O157:H7 strain EDL933 in response to norfloxacin.The bacterial translation stress response.Global analysis of heat shock response in Desulfovibrio vulgaris HildenboroughRegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.Transcription factors in Escherichia coli prefer the holo conformationLessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis.Using a large-scale knowledge database on reactions and regulations to propose key upstream regulators of various sets of molecules participating in cell metabolism.Perturbed states of the bacterial chromosome: a thymineless death case studySystematic identification and analysis of frequent gene fusion events in metabolic pathwaysGenome-wide mapping of mutations at single-nucleotide resolution for protein, metabolic and genome engineering.Transcription profile of Escherichia coli: genomic SELEX search for regulatory targets of transcription factorsREP sequences: Mediators of the environmental stress response?YmdB: a stress-responsive ribonuclease-binding regulator of E. coli RNase III activityGene promoter scan methodology for identifying and classifying coregulated promoters
P2860
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P2860
Regulatory network of Escherichia coli: consistency between literature knowledge and microarray profiles.
description
2003 nî lūn-bûn
@nan
2003年の論文
@ja
2003年学术文章
@wuu
2003年学术文章
@zh-cn
2003年学术文章
@zh-hans
2003年学术文章
@zh-my
2003年学术文章
@zh-sg
2003年學術文章
@yue
2003年學術文章
@zh
2003年學術文章
@zh-hant
name
Regulatory network of Escheric ...... ledge and microarray profiles.
@en
type
label
Regulatory network of Escheric ...... ledge and microarray profiles.
@en
prefLabel
Regulatory network of Escheric ...... ledge and microarray profiles.
@en
P2093
P2860
P356
P1433
P1476
Regulatory network of Escheric ...... wledge and microarray profiles
@en
P2093
Araceli M Huerta
David A Rosenblueth
Fred R Blattner
Jeremy D Glasner
José Antonio Loza
P2860
P304
P356
10.1101/GR.1387003
P577
2003-11-01T00:00:00Z