An efficient method for genome-wide polyadenylation site mapping and RNA quantification
about
Processing and transcriptome expansion at the mRNA 3' end in health and disease: finding the right endRNA-Seq methods for transcriptome analysisAlternative cleavage and polyadenylation: the long and short of itRNA-binding proteins in neurodegeneration: Seq and you shall receiveGenome-wide mapping of yeast RNA polymerase II terminationAnalysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation.Comparative assessment of methods for the computational inference of transcript isoform abundance from RNA-seq data.Complex Selection on Human Polyadenylation Signals Revealed by Polymorphism and Divergence DataAlternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions.A high-quality annotated transcriptome of swine peripheral blood.Defining the 5΄ and 3΄ landscape of the Drosophila transcriptome with Exo-seq and RNaseH-seq.Genome-wide identification of transcript start and end sites by transcript isoform sequencing.RNA sequencing: from tag-based profiling to resolving complete transcript structure.Transcription mediated insulation and interference direct gene cluster expression switchesAccurate identification of polyadenylation sites from 3' end deep sequencing using a naive Bayes classifier.Multiple transcripts from a 3'-UTR reporter vary in sensitivity to nonsense-mediated mRNA decay in Saccharomyces cerevisiaeMultiplex analysis of polyA-linked sequences (MAPS): an RNA-seq strategy to profile poly(A+) RNASequencing of first-strand cDNA library reveals full-length transcriptomes.Evaluation of two statistical methods provides insights into the complex patterns of alternative polyadenylation site switchingPAT-seq: a method to study the integration of 3'-UTR dynamics with gene expression in the eukaryotic transcriptome.Genome-wide quantification of 5'-phosphorylated mRNA degradation intermediates for analysis of ribosome dynamicsAccurate Profiling of Gene Expression and Alternative Polyadenylation with Whole Transcriptome Termini Site Sequencing (WTTS-Seq).Prediction of Poly(A) Sites by Poly(A) Read Mapping.Epitope-tagged yeast strains reveal promoter driven changes to 3'-end formation and convergent antisense-transcription from common 3' UTRsAlterations in polyadenylation and its implications for endocrine disease.Translational Capacity of a Cell Is Determined during Transcription Elongation via the Ccr4-Not Complex.Extensive transcriptional heterogeneity revealed by isoform profiling.The differential expression of alternatively polyadenylated transcripts is a common stress-induced response mechanism that modulates mammalian mRNA expression in a quantitative and qualitative fashion.Common genomic elements promote transcriptional and DNA replication roadblocks.Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano.Gene regulation by antisense transcription.Genome-wide mapping of polyadenylation sites in fission yeast reveals widespread alternative polyadenylation.Whole transcriptome analysis with sequencing: methods, challenges and potential solutions.Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster.Genome-wide genetic screening with chemically mutagenized haploid embryonic stem cells.Parallel reverse genetic screening in mutant human cells using transcriptomicsCleavage and polyadenylation: Ending the message expands gene regulation.A global genetic interaction network maps a wiring diagram of cellular function.The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons.FLT1 and transcriptome-wide polyadenylation site (PAS) analysis in preeclampsia.
P2860
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P2860
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
description
2013 nî lūn-bûn
@nan
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
2013年论文
@zh
2013年论文
@zh-cn
name
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
@en
type
label
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
@en
prefLabel
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
@en
P2093
P2860
P50
P356
P1476
An efficient method for genome-wide polyadenylation site mapping and RNA quantification
@en
P2093
Aino I Järvelin
Lars M Steinmetz
Manu M Tekkedil
Stefan Wilkening
P2860
P356
10.1093/NAR/GKS1249
P577
2013-01-07T00:00:00Z