Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
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CHARMM: the biomolecular simulation programStructure of Antibody F425-B4e8 in Complex with a V3 Peptide Reveals a New Binding Mode for HIV-1 NeutralizationAntigen Recognition by Variable Lymphocyte ReceptorsStructural and Functional Analysis of the Globular Head Domain of p115 Provides Insight into Membrane TetheringMolecular Insights into γδ T Cell Costimulation by an Anti-JAML AntibodyStructure-Based Design of a Protein Immunogen that Displays an HIV-1 gp41 Neutralizing EpitopeMethyl, ethyl, propyl, butyl: futile but not for water, as the correlation of structure and thermodynamic signature shows in a congeneric series of thermolysin inhibitorsCrystal structure of an idiotype-anti-idiotype Fab complex26-10 Fab-digoxin complex: affinity and specificity due to surface complementarityCrystal structure of a human immunodeficiency virus type 1 neutralizing antibody, 50.1, in complex with its V3 loop peptide antigenEffective energy function for proteins in solutionImprovement of side-chain modeling in proteins with the self-consistent mean field theory method based on an analysis of the factors influencing prediction.3d interaction homology: The structurally known rotamers of tyrosine derive from a surprisingly limited set of information-rich hydropathic interaction environments described by maps.Calculation of electron paramagnetic resonance spectra from Brownian dynamics trajectories: application to nitroxide side chains in proteinsA stochastic algorithm for global optimization and for best populations: a test case of side chains in proteins.The structure of the death receptor 4-TNF-related apoptosis-inducing ligand (DR4-TRAIL) complex.The human cytomegalovirus UL44 C clamp wraps around DNA.Ion channels in icosahedral virus: a comparative analysis of the structures and binding sites at their fivefold axes.Development and current status of the CHARMM force field for nucleic acids.Saccharin sulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII.Internal dynamics of proteins. Short time and long time motions of aromatic sidechains in PTI.Remote thioredoxin recognition using evolutionary conservation and structural dynamics.Relative orientation of close-packed beta-pleated sheets in proteins.MoViES: molecular vibrations evaluation server for analysis of fluctuational dynamics of proteins and nucleic acids.Three-dimensional structure of proteins determined by molecular dynamics with interproton distance restraints: application to crambinProtein side chain conformation predictions with an MMGBSA energy function.Effect of the Crystal Environment on Side-Chain Conformational Dynamics in Cyanovirin-N Investigated through Crystal and Solution Molecular Dynamics Simulations.Bayesian statistical analysis of protein side-chain rotamer preferences.Electrostatic potential molecular surfaces.Dynamical theory of activated processes in globular proteins.Modelling the unusual temperature dependence of atomic displacements in proteins by local nonharmonic potentials.Configurational-bias sampling technique for predicting side-chain conformations in proteinsOn the sensitivity of MD trajectories to changes in water-protein interaction parameters: the potato carboxypeptidase inhibitor in water as a test case for the GROMOS force field.Dynamics of activated processes in globular proteins.Normal mode paths for hydrogen exchange in the peptide ferrichrome.Structure of proteins with single-site mutations: a minimum perturbation approach.Empirical hydrogen-bond potential functions--an old hat reconditioned.A molecular mechanical study of complexes formed between 4-nitroquinoline-N-oxide and dinucleoside phosphates.Theoretical studies of the structure and energies of base-paired nucleotides and the dissociation kinetics of a proflavine-dinucleotide complex.Complete epitopes for vaccine design derived from a crystal structure of the broadly neutralizing antibodies PGT128 and 8ANC195 in complex with an HIV-1 Env trimer.
P2860
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P2860
Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
description
1979 nî lūn-bûn
@nan
1979年の論文
@ja
1979年論文
@yue
1979年論文
@zh-hant
1979年論文
@zh-hk
1979年論文
@zh-mo
1979年論文
@zh-tw
1979年论文
@wuu
1979年论文
@zh
1979年论文
@zh-cn
name
Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
@en
type
label
Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
@en
prefLabel
Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
@en
P356
P1433
P1476
Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment.
@en
P2093
P304
P356
10.1021/BI00574A022
P407
P577
1979-04-01T00:00:00Z