Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the Arabidopsis steady state transcriptome. - Wikidata - awgldk - TriplyDB

Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the Arabidopsis steady state transcriptome.

Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the Arabidopsis steady state transcriptome.

http://www.wikidata.org/entity/Q44328036

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Nonsense-mediated mRNA decay: novel mechanistic insights and biological impact The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis SplAdder: identification, quantification and testing of alternative splicing events from RNA-Seq data Spliceosomal protein eftud2 mutation leads to p53-dependent apoptosis in zebrafish neural progenitors.Expression of the eRF1 translation termination factor is controlled by an autoregulatory circuit involving readthrough and nonsense-mediated decay in plants.A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize Alternative splicing and nonsense-mediated decay of circadian clock genes under environmental stress conditions in Arabidopsis A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing.Nonsense-mediated RNA decay--a switch and dial for regulating gene expression Circadian rhythms and post-transcriptional regulation in higher plants.Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella).Genome-Wide Analysis of Alternative Splicing during Development and Drought Stress in Maize.Stochastic alternative splicing is prevalent in mungbean (Vigna radiata).Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Nonsense-mediated mRNA decay in Tetrahymena is EJC independent and requires a protozoa-specific nuclease Proteogenomic analysis reveals alternative splicing and translation as part of the abscisic acid response in Arabidopsis seedlings.An Inventory of Nutrient-Responsive Genes in Arabidopsis Root Hairs.Intron retention-dependent gene regulation in Cryptococcus neoformans SWATH-MS Quantitative Analysis of Proteins in the Rice Inferior and Superior Spikelets during Grain Filling.Possible Role of MADS AFFECTING FLOWERING 3 and B-BOX DOMAIN PROTEIN 19 in Flowering Time Regulation of Arabidopsis Mutants with Defects in Nonsense-Mediated mRNA Decay.Response of Gene Expression and Alternative Splicing to Distinct Growth Environments in Tomato.Complexity of the alternative splicing landscape in plants.Emerging functions of alternative splicing coupled with nonsense-mediated decay.Shedding light on the chloroplast as a remote control of nuclear gene expression.Genome-wide analysis of specific alterations in transcript structure and accumulation caused by nutrient deficiencies in Arabidopsis thaliana.Activity and roles of Arabidopsis thaliana XRN family exoribonucleases in noncoding RNA pathways.MMR: a tool for read multi-mapper resolution.Selection on Position of Nonsense Codons in Introns.The RNA Polymerase II C-Terminal Domain Phosphatase-Like Protein FIERY2/CPL1 Interacts with eIF4AIII and Is Essential for Nonsense-Mediated mRNA Decay in Arabidopsis.A genome-wide transcriptome and translatome analysis of Arabidopsis transposons identifies a unique and conserved genome expression strategy for Ty1/Copia retroelements.The feedback control of UPF3 is crucial for RNA surveillance in plants.Lost in Translation: Pitfalls in Deciphering Plant Alternative Splicing Transcripts.The Arabidopsis NMD Factor UPF3 Is Feedback-Regulated at Multiple Levels and Plays a Role in Plant Response to Salt Stress.Genome-wide analysis of alternative splicing landscapes modulated during plant-virus interactions in Brachypodium distachyon.Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation.Transcriptome analysis indicates considerable divergence in alternative splicing between duplicated genes in Arabidopsis thaliana.Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana.High-Resolution Expression Map of the Arabidopsis Root Reveals Alternative Splicing and lincRNA Regulation.The Arabidopsis class II sirtuin is a lysine deacetylase and interacts with mitochondrial energy metabolism.The fitness cost of mis-splicing is the main determinant of alternative splicing patterns.

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Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the Arabidopsis steady state transcriptome.

http://www.wikidata.org/entity/Q44328036

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2013 nî lūn-bûn

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2013年の論文

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2013年学术文章

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2013年學術文章

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Nonsense-mediated decay of alt ...... is steady state transcriptome.

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Nonsense-mediated decay of alt ...... is steady state transcriptome.

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Nonsense-mediated decay of alt ...... is steady state transcriptome.

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Nonsense-mediated decay of alt ...... is steady state transcriptome.

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Nonsense-mediated decay of alt ...... is steady state transcriptome.

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Andreas Wachter

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André Kahles

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Anil K Kesarwani

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Eva Stauffer

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Gabriele Drechsel

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Jonas Behr

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Philipp Drewe

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P2860

An unappreciated role for RNA surveillance

Differential expression analysis for sequence count data

Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20

Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay

The mRNA surveillance protein hSMG-1 functions in genotoxic stress response pathways in mammalian cells

The human RNA surveillance factor UPF1 is required for S phase progression and genome stability

Regulated degradation of replication-dependent histone mRNAs requires both ATR and Upf1

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

A human homolog of yeast Est1 associates with telomerase and uncaps chromosome ends when overexpressed

The nonsense-mediated decay RNA surveillance pathway

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