LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
about
Enzyme structure captures four cysteines aligned for disulfide relayAdvancements in therapeutically targeting orphan GPCRsCommon and distant structural characteristics of feruloyl esterase families from Aspergillus oryzaeStructural characterization of a recombinant fusion protein by instrumental analysis and molecular modelingStructure-based prediction of asparagine and aspartate degradation sites in antibody variable regionsDeciphering the signaling mechanisms of the plant cell wall degradation machinery in Aspergillus oryzaeLoopIng: a template-based tool for predicting the structure of protein loopsLEAP: highly accurate prediction of protein loop conformations by integrating coarse-grained sampling and optimized energy scores with all-atom refinement of backbone and side chainsTemplate-based protein modeling: recent methodological advances.Monoamine neurotransmitters as substrates for novel tick sulfotransferases, homology modeling, molecular docking, and enzyme kinetics.Fast de novo discovery of low-energy protein loop conformations.A novel antibody humanization method based on epitopes scanning and molecular dynamics simulationModeling of loops in proteins: a multi-method approach.Improving predicted protein loop structure ranking using a Pareto-optimality consensus method.The design of novel inhibitors for treating cancer by targeting CDC25B through disruption of CDC25B-CDK2/Cyclin A interaction using computational approaches.Structure-based high-throughput epitope analysis of hexon proteins in B and C species human adenoviruses (HAdVs)The antibodies against the computationally designed mimic of the glycoprotein hormone receptor transmembrane domain provide insights into receptor activation and suppress the constitutively activated receptor mutants.A docking-based receptor library of antibiotics and its novel application in predicting chronic mixture toxicity for environmental risk assessment.Fast protein loop sampling and structure prediction using distance-guided sequential chain-growth Monte Carlo method.Structure prediction of loops with fixed and flexible stemsA Novel Di-Leucine Motif at the N-Terminus of Human Organic Solute Transporter Beta Is Essential for Protein Association and Membrane Localization.Fully automated antibody structure prediction using BIOVIA tools: Validation studyPotassium-3-beta-hydroxy-20-oxopregn-5-en-17-alpha-yl sulfate: a novel inhibitor of 78 kDa glucose-regulated protein.Prediction of protein loop structures using a local move Monte Carlo approach and a grid-based force fieldAntiviral activity of (+)-rutamarin against Kaposi's sarcoma-associated herpesvirus by inhibition of the catalytic activity of human topoisomerase II.Exploring the Role of the Ω-Loop in the Evolution of Ceftazidime Resistance in the PenA β-Lactamase from Burkholderia multivorans, an Important Cystic Fibrosis PathogenConformational sampling in template-free protein loop structure modeling: an overview.Role of the transmembrane domain 4/extracellular loop 2 junction of the human gonadotropin-releasing hormone receptor in ligand binding and receptor conformational selection.Progress in super long loop prediction.The unique N-terminal insert in the ribosomal protein, phosphoprotein P0, of Tetrahymena thermophila: Bioinformatic evidence for an interaction with 26S rRNA.Antibodies as a model system for comparative model refinement.In -silico molecular docking analysis of prodigiosin and cycloprodigiosin as COX-2 inhibitors.SL2: an interactive webtool for modeling of missing segments in proteinsComputational elucidation of structural basis for ligand binding with Leishmania donovani adenosine kinase.Mitogen Activated Protein Kinase (MPK) Interacts With Auxin Influx Carrier (OsAux/LAX1) Involved in Auxin Signaling in Plant.Automated antibody structure prediction using Accelrys tools: results and best practices.Structural comparison, substrate specificity, and inhibitor binding of AGPase small subunit from monocot and dicot: present insight and future potential.Modeling the possible conformations of the extracellular loops in G-protein-coupled receptors.SuperLooper--a prediction server for the modeling of loops in globular and membrane proteins.Computational insights into the subtype selectivity and "message-address-efficacy" mechanisms of opioid receptors through JDTic binding and unbinding.
P2860
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P2860
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh
2008年學術文章
@zh-hant
name
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@en
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@nl
type
label
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@en
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@nl
prefLabel
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@en
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@nl
P356
P1476
LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
@en
P2093
Velin Z Spassov
P304
P356
10.1093/PROTEIN/GZM083
P577
2008-01-14T00:00:00Z