Sequence-based identification of 3D structural modules in RNA with RMDetect.
about
Isostericity and tautomerism of base pairs in nucleic acidsPrinciples of translational control: an overviewNucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine RiboswitchAnnotating RNA motifs in sequences and alignmentsAn energetically beneficial leader-linker interaction abolishes ligand-binding cooperativity in glycine riboswitchesStructural architecture of the human long non-coding RNA, steroid receptor RNA activator.Using sequence signatures and kink-turn motifs in knowledge-based statistical potentials for RNA structure prediction.Clustering RNA structural motifs in ribosomal RNAs using secondary structural alignment.SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction.RNAMotifScanX: a graph alignment approach for RNA structural motif identification.RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures.An Efficient Minimum Free Energy Structure-Based Search Method for Riboswitch Identification Based on Inverse RNA FoldingNew in silico approach to assessing RNA secondary structures with non-canonical base pairs.RNA modeling, naturallyRNA 3D Modules in Genome-Wide Predictions of RNA 2D StructureRNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure predictionIdentifying novel sequence variants of RNA 3D motifsMetal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.RNASTAR: an RNA STructural Alignment Repository that provides insight into the evolution of natural and artificial RNAs.JAR3D Webserver: Scoring and aligning RNA loop sequences to known 3D motifsDirected evolution of a synthetic RNA-protein module to create a new translational switch.The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective.Conservation of a triple-helix-forming RNA stability element in noncoding and genomic RNAs of diverse virusesA critical base pair in k-turns determines the conformational class adopted, and correlates with biological function.Automated identification of RNA 3D modules with discriminative power in RNA structural alignments.Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure.A structural module in RNase P expands the variety of RNA kinks.Computational Methods for Modeling Aptamers and Designing Riboswitches.Efficient approximations of RNA kinetics landscape using non-redundant sampling.Topological Structure Determination of RNA Using Small-Angle X-Ray Scattering.PATTERNA: transcriptome-wide search for functional RNA elements via structural data signatures.Traditional Chemical Mapping of RNA Structure In Vitro and In Vivo.Mining for recurrent long-range interactions in RNA structures reveals embedded hierarchies in network families.
P2860
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P2860
Sequence-based identification of 3D structural modules in RNA with RMDetect.
description
2011 nî lūn-bûn
@nan
2011年の論文
@ja
2011年学术文章
@wuu
2011年学术文章
@zh
2011年学术文章
@zh-cn
2011年学术文章
@zh-hans
2011年学术文章
@zh-my
2011年学术文章
@zh-sg
2011年學術文章
@yue
2011年學術文章
@zh-hant
name
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@en
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@nl
type
label
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@en
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@nl
prefLabel
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@en
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@nl
P356
P1433
P1476
Sequence-based identification of 3D structural modules in RNA with RMDetect.
@en
P2093
José Almeida Cruz
P2888
P304
P356
10.1038/NMETH.1603
P50
P577
2011-05-08T00:00:00Z