BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis. - Wikidata - awgldk - TriplyDB

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

http://www.wikidata.org/entity/Q48182406

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Evolutionary history of the grey-faced Sengi, Rhynchocyon udzungwensis, from Tanzania: a molecular and species distribution modelling approach Does more sequence data improve estimates of galliform phylogeny? Analyses of a rapid radiation using a complete data matrix Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts Phylogeny of Campanuloideae (Campanulaceae) with emphasis on the utility of nuclear pentatricopeptide repeat (PPR) genes Going to Extremes: Contrasting Rates of Diversification in a Recent Radiation of New World Passerine Birds Multilocus inference of species trees and DNA barcoding The estimation of tree posterior probabilities using conditional clade probability distributions Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye Evaluating evolutionary history in the face of high gene tree discordance in Australian Gehyra (Reptilia: Gekkonidae)Conflicting genomic signals affect phylogenetic inference in four species of North American pines Computational Performance and Statistical Accuracy of *BEAST and Comparisons with Other Methods Thousands of RAD-seq Loci Fully Resolve the Phylogeny of the Highly Disjunct Arctic-Alpine Genus Diapensia (Diapensiaceae)Species-Level Phylogeny and Polyploid Relationships in Hordeum (Poaceae) Inferred by Next-Generation Sequencing and In Silico Cloning of Multiple Nuclear Loci A tribal level phylogeny of Lake Tanganyika cichlid fishes based on a genomic multi-marker approach Multilocus species trees show the recent adaptive radiation of the mimetic heliconius butterflies Concatenation and Species Tree Methods Exhibit Statistically Indistinguishable Accuracy under a Range of Simulated Conditions Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics Phylogeny of the cycads based on multiple single-copy nuclear genes: congruence of concatenated parsimony, likelihood and species tree inference methods Unraveling reticulate evolution in North American Dryopteris (Dryopteridaceae)Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives Molecular systematics of the deep-sea hydrothermal vent endemic Brachyuran family Bythograeidae: a comparison of three Bayesian species tree methods Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)Accurate phylogenetic tree reconstruction from quartets: a heuristic approach.Fast and accurate methods for phylogenomic analyses ASTRAL: genome-scale coalescent-based species tree estimation.African relapsing Fever borreliae genomospecies revealed by comparative genomics.Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics.Digits lost or gained? Evidence for pedal evolution in the dwarf salamander complex (Eurycea, Plethodontidae)BBCA: Improving the scalability of *BEAST using random binning.Disk covering methods improve phylogenomic analyses.Simulating gene trees under the multispecies coalescent and time-dependent migration Phylogeny of bacterial and archaeal genomes using conserved genes: supertrees and supermatrices.Habitat and host indicate lineage identity in Colletotrichum gloeosporioides s.l. from wild and agricultural landscapes in North America.Detecting phylogenetic breakpoints and discordance from genome-wide alignments for species tree reconstruction.Analyzing and synthesizing phylogenies using tree alignment graphs Not as ubiquitous as we thought: taxonomic crypsis, hidden diversity and cryptic speciation in the cosmopolitan fungus Thelonectria discophora (Nectriaceae, Hypocreales, Ascomycota).Phylogeny of zebrafish, a "model species," within Danio, a "model genus"Inferring gene family histories in yeast identifies lineage specific expansions.The evolutionary history of Darwin's finches: speciation, gene flow, and introgression in a fragmented landscape.

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BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

http://www.wikidata.org/entity/Q48182406

description

2010 nî lūn-bûn

@nan

2010年の論文

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

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2010年学术文章

@zh-sg

2010年學術文章

@yue

2010年學術文章

@zh

2010年學術文章

@zh-hant

name

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

@en

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

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type

label

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

@en

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

@nl

prefLabel

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

@en

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

@nl

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BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

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Bret R Larget

http://www.w3.org/2001/XMLSchema#string

Colin N Dewey

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Satish K Kotha

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P2860

MrBayes 3: Bayesian phylogenetic inference under mixed models

Bayesian inference of species trees from multilocus data

Inconsistency of phylogenetic estimates from concatenated data under coalescence.

Discordance of species trees with their most likely gene trees.

Properties of consensus methods for inferring species trees from gene trees.

Dealing with incongruence in phylogenomic analyses.

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

BEST: Bayesian estimation of species trees under the coalescent model.

Bayesian estimation of concordance among gene trees.

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2910-2911

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scholarly article

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10.1093/BIOINFORMATICS/BTQ539

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22

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26

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2010-09-21T00:00:00Z

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46403062

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20861028

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