about
The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strainDesigning Efficient Spaced Seeds for SOLiD Read MappingGASSST: global alignment short sequence search toolPerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seedsFast and accurate short read alignment with Burrows-Wheeler transformAlignment of Short Reads: A Crucial Step for Application of Next-Generation Sequencing Data in Precision MedicineDiscovering epistasis in large scale genetic association studies by exploiting graphics cardsUncovering the sources of DNA found on the Turin ShroudESSENTIALS: software for rapid analysis of high throughput transposon insertion sequencing data.Tools for mapping high-throughput sequencing data.Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data.Systematic evaluation of spliced alignment programs for RNA-seq dataStatistical Issues in the Analysis of ChIP-Seq and RNA-Seq Data.Evaluation and comparison of multiple aligners for next-generation sequencing data analysis.Comprehensive transcript profiling of two grapevine rootstock genotypes contrasting in drought susceptibility links the phenylpropanoid pathway to enhanced toleranceCRCDA--Comprehensive resources for cancer NGS data analysis.SpliceJumper: a classification-based approach for calling splicing junctions from RNA-seq data.From next-generation resequencing reads to a high-quality variant data set.MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping.Short Read Mapping: An Algorithmic Tour.Probe-level analysis of expression microarrays characterizes isoform-specific degradation during mouse oocyte maturation.Whole-genome in-silico subtractive hybridization (WISH)--using massive sequencing for the identification of unique and repetitive sex-specific sequences: the example of Schistosoma mansoni.Brain RNA-Seq Profiling of the Mucopolysaccharidosis Type II Mouse Model.HiTEC: accurate error correction in high-throughput sequencing data.Sequence profiling of the Saccharomyces cerevisiae genome permits deconvolution of unique and multialigned reads for variant detectionVARiD: a variation detection framework for color-space and letter-space platforms.A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype.Uncovering the complexity of transcriptomes with RNA-Seq.CGDSNPdb: a database resource for error-checked and imputed mouse SNPs.SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data.Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains.PASS-bis: a bisulfite aligner suitable for whole methylome analysis of Illumina and SOLiD reads.Discovery of mutations in Saccharomyces cerevisiae by pooled linkage analysis and whole-genome sequencingProfiling of skeletal muscle Ankrd2 protein in human cardiac tissue and neonatal rat cardiomyocytes.High Performance Multiple Sequence Alignment System for Pyrosequencing Reads from Multiple Reference Genomes.Contradiction between plastid gene transcription and function due to complex posttranscriptional splicing: an exemplary study of ycf15 function and evolution in angiosperms.CGAP-align: a high performance DNA short read alignment tool.Benchmarking short sequence mapping toolsRNA sequencing of the exercise transcriptome in equine athletes.piRNA profiling during specific stages of mouse spermatogenesis.
P2860
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P2860
description
2009 nî lūn-bûn
@nan
2009年の論文
@ja
2009年学术文章
@wuu
2009年学术文章
@zh
2009年学术文章
@zh-cn
2009年学术文章
@zh-hans
2009年学术文章
@zh-my
2009年学术文章
@zh-sg
2009年學術文章
@yue
2009年學術文章
@zh-hant
name
PASS: a program to align short sequences.
@en
PASS: a program to align short sequences.
@nl
type
label
PASS: a program to align short sequences.
@en
PASS: a program to align short sequences.
@nl
prefLabel
PASS: a program to align short sequences.
@en
PASS: a program to align short sequences.
@nl
P2093
P2860
P356
P1433
P1476
PASS: a program to align short sequences.
@en
P2093
Alessandra Bilardi
Alessandro Albiero
Claudio Forcato
Davide Campagna
Elisa Caniato
Svetlin Manavski
P2860
P304
P356
10.1093/BIOINFORMATICS/BTP087
P407
P577
2009-02-13T00:00:00Z